Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 CASC19-284ENST00000642142 1868 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 CASC19-248ENST00000641674 1356 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 CASC19-260ENST00000641828 2001 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AP002512.4-202ENST00000641599 4530 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RNA5SP319-201ENST00000362768 119 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RN7SKP160-201ENST00000363804 340 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RNU6-98P-201ENST00000384173 107 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 HMGB3P7-201ENST00000400214 611 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 MTND4P22-201ENST00000413116 1169 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 SEPT2P1-201ENST00000419651 180 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 PTP4A1P5-201ENST00000420305 455 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 NANOGP4-201ENST00000427230 913 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AP001324.1-201ENST00000428553 399 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC073143.1-201ENST00000436316 395 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 CYCSP11-201ENST00000436426 315 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC011979.1-201ENST00000472300 483 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 TRBV8-2-201ENST00000475637 270 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RPS3AP43-201ENST00000479743 781 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 BLZF2P-201ENST00000553776 1130 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RN7SL356P-201ENST00000582228 248 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 NBR2-204ENST00000587322 63 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AL358072.1-201ENST00000604156 575 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AL451086.1-201ENST00000605596 223 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AL450489.1-201ENST00000612071 468 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 RNA5SP439-201ENST00000617595 124 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC021106.3-201ENST00000623925 531 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC007671.2-201ENST00000637344 619 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 AC053481.2-202ENST00000582394 1500 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 BCORP1-203ENST00000513194 5093 ntBASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.06□□□□□ -1.6
CTHRC1Q96CG8 TTC39DP-201ENST00000416781 1688 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 Z98755.1-201ENST00000407015 1384 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 MIR133B-201ENST00000362210 119 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RNU6-560P-201ENST00000364007 108 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL391361.1-201ENST00000405580 489 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 LUZP4P1-201ENST00000415420 344 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 ZNF885P-201ENST00000420174 1098 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 USP9YP26-201ENST00000421008 661 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RPS27AP6-201ENST00000427962 448 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 MTCO1P3-201ENST00000429327 192 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC005345.1-201ENST00000431868 217 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 RPL12P18-201ENST00000437175 325 ntBASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.05□□□□□ -1.6
CTHRC1Q96CG8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms