Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AP005431.1-201ENST00000618479 319 ntBASIC5.38□□□□□ -1.55
KRT78Q8N1N4 AP002791.1-201ENST00000623291 381 ntBASIC5.38□□□□□ -1.55
KRT78Q8N1N4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.38□□□□□ -1.55
KRT78Q8N1N4 AC144833.1-201ENST00000567953 4089 ntBASIC5.38□□□□□ -1.55
KRT78Q8N1N4 OR13C1P-202ENST00000641378 2919 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RNA5SP453-201ENST00000362503 119 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RN7SKP185-201ENST00000362813 326 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RNA5SP510-201ENST00000364697 99 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 Y_RNA.465-201ENST00000384293 102 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MIR551A-201ENST00000385042 96 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 PAICSP7-201ENST00000419829 962 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 IPPKP1-201ENST00000422501 768 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RPL21P43-201ENST00000425440 472 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RPL7P56-201ENST00000429441 717 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC099670.2-201ENST00000435130 321 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC239809.1-201ENST00000450470 217 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC079776.3-201ENST00000450665 370 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MTCYBP35-201ENST00000503630 1137 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC048346.1-201ENST00000510247 144 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC109471.1-201ENST00000511631 612 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MTCO2P15-201ENST00000532655 656 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SERPINE4P-201ENST00000554978 281 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MTCYBP27-201ENST00000555160 670 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SETP1-201ENST00000556014 845 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MTCYBP28-201ENST00000566728 1132 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC022662.1-201ENST00000580252 331 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC008536.1-201ENST00000602872 669 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 ECM1P2-201ENST00000503354 1577 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.37□□□□□ -1.55
KRT78Q8N1N4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
KRT78Q8N1N4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT78Q8N1N4 AL353796.1-201ENST00000561542 3241 ntBASIC5.36□□□□□ -1.55
KRT78Q8N1N4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms