Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 ZNF863P-201ENST00000426746 417 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 UBE2V1P3-201ENST00000439651 417 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC073909.1-201ENST00000447112 999 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC097493.1-201ENST00000463958 372 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC011476.1-201ENST00000466725 307 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC006511.1-201ENST00000470614 315 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC090638.1-201ENST00000498296 909 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 SNORA58-201ENST00000505219 137 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 SCARNA18.1-201ENST00000516330 83 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 RNA5SP438-201ENST00000516561 112 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 PMS2P3-207ENST00000529061 717 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC068587.4-201ENST00000533893 186 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC016957.1-201ENST00000534895 309 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC015818.6-201ENST00000584274 634 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 SLC25A36P1-201ENST00000590111 465 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC012065.4-201ENST00000602445 679 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC005084.1-201ENST00000605160 304 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AL513218.1-201ENST00000606527 391 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC109309.2-201ENST00000612597 332 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AC009120.2-204ENST00000621548 2032 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 WBP11P1-201ENST00000562560 1931 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 MTCO1P11-201ENST00000429111 1528 ntBASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
NPAS4Q8IUM7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL136531.3-201ENST00000624378 3658 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC127070.3-201ENST00000503695 3263 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL117339.4-201ENST00000608335 7063 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC024651.2-201ENST00000562480 2098 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TMSB4XP4-201ENST00000323496 618 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SNRPEP3-201ENST00000338402 276 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RNA5SP350-201ENST00000363298 111 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC087752.1-201ENST00000391360 558 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC025750.1-201ENST00000399891 379 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC245096.1-201ENST00000413104 546 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RPS7P8-201ENST00000418311 581 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 UBTFL3-201ENST00000418934 1024 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 EIF1P1-201ENST00000421436 341 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 RPS27AP14-201ENST00000422868 454 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC091862.1-201ENST00000438016 1100 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 SNRPEP7-201ENST00000438350 220 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC098614.3-201ENST00000438957 440 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC239367.2-201ENST00000447309 705 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 EPS15P1-201ENST00000448836 336 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC005077.1-201ENST00000449226 375 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 AC104763.1-201ENST00000475274 360 ntBASIC6.74□□□□□ -1.33
NPAS4Q8IUM7 UBTFL6-201ENST00000477929 1024 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms