Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 DPRXP4-201ENST00000578053 568 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 MIR744-201ENST00000578242 98 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC124856.1-201ENST00000600819 896 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 DPRXP5-201ENST00000604662 539 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC100767.2-201ENST00000604840 693 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL139124.1-201ENST00000609123 421 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC100847.1-201ENST00000611316 481 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC023158.2-201ENST00000614876 543 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC123768.4-201ENST00000616244 701 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC091932.2-201ENST00000623014 291 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC017037.3-201ENST00000625016 472 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AF001550.2-201ENST00000636643 217 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL353796.1-201ENST00000561542 3241 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC004817.4-201ENST00000602396 3625 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC021242.1-201ENST00000507315 2035 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC027088.4-201ENST00000611559 1947 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AL022393.1-201ENST00000625142 1677 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC104454.1-201ENST00000421341 1401 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 ZNF652P1-201ENST00000442420 1309 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 SNORD113-6-201ENST00000363345 75 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 Y_RNA.192-201ENST00000363977 102 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 RNA5SP241-201ENST00000391326 114 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 OR6C64P-201ENST00000419708 825 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC007394.1-201ENST00000421941 531 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 EIF5AP4-201ENST00000441206 465 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 RPL23AP76-201ENST00000441860 458 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 PPIAP27-201ENST00000453800 265 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC026348.1-201ENST00000462549 1053 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC099521.1-201ENST00000482557 334 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AP000563.1-201ENST00000490865 758 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 RPL9P15-201ENST00000491096 532 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 UBA52P3-201ENST00000491303 382 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC008837.2-201ENST00000513076 418 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AP001207.1-201ENST00000524051 481 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC007956.1-201ENST00000555623 542 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC087465.1-201ENST00000560574 245 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 MIR4776-2-201ENST00000580204 80 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC097065.2-201ENST00000608159 533 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 MIR6793-201ENST00000612376 63 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 OR11H2-202ENST00000641517 1085 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AC083843.3-201ENST00000623679 2186 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RNF220Q5VTB9 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
RNF220Q5VTB9 DBF4P1-201ENST00000412976 1892 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL034370.1-201ENST00000397254 1590 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AF287957.1-201ENST00000607368 1595 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AC104966.1-201ENST00000467010 1464 ntBASIC5.34□□□□□ -1.55
RNF220Q5VTB9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
RNF220Q5VTB9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms