Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 CR769776.1-201ENST00000441254 787 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ARL5AP2-201ENST00000444698 533 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RPL7P32-201ENST00000457119 744 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RPL7P48-201ENST00000461513 746 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 NAP1L1P3-201ENST00000462291 880 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RPS29P22-201ENST00000472363 168 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 NDUFA5P9-201ENST00000472609 340 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RPL7P6-201ENST00000480903 738 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC008083.2-201ENST00000546707 476 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC114947.2-201ENST00000565748 2125 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 MIR548Y-201ENST00000582739 110 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC095055.1-201ENST00000603472 1113 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC090525.3-201ENST00000605601 189 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 AL078621.3-201ENST00000623707 2042 ntBASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC44A4Q53GD3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 RNU4-4P-201ENST00000364588 130 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 RNU6-224P-201ENST00000384055 107 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 RPL23AP59-201ENST00000399415 461 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 SETP15-201ENST00000412724 337 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 KRR1P1-201ENST00000419430 803 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 OR6K4P-201ENST00000423179 955 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 SRSF1P1-201ENST00000424058 520 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC092017.2-201ENST00000427600 362 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 YWHAEP5-201ENST00000431545 765 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CEACAMP9-201ENST00000442990 513 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 MED28P3-201ENST00000444288 531 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AL161722.1-201ENST00000446972 1032 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 Z73417.1-201ENST00000447373 778 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 RNU7-140P-201ENST00000459546 60 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 GYG1P1-201ENST00000460864 698 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC107015.1-201ENST00000466902 747 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC079203.1-201ENST00000487972 404 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 snoU109.5-201ENST00000516231 132 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 OR11H3P-201ENST00000554547 982 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ATP5F1P7-201ENST00000567330 760 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 MIR3934-201ENST00000579806 107 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CCDC58P3-201ENST00000590792 430 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC002487.1-201ENST00000604565 994 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AL121594.5-201ENST00000631724 573 ntBASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC44A4Q53GD3 AL445523.1-201ENST00000451184 1362 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms