Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC2.55□□□□□ -2
LINC01554Q52M75 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.55□□□□□ -2
LINC01554Q52M75 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01554Q52M75 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC01554Q52M75 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 AC005183.1-201ENST00000603687 1979 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 AP002001.2-201ENST00000529025 1469 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01554Q52M75 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01554Q52M75 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 RN7SKP184-201ENST00000362348 333 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RNU6-386P-201ENST00000362650 107 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RNA5SP295-201ENST00000362655 121 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RNA5SP232-201ENST00000364144 119 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 MIR130A-201ENST00000385274 89 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AP000580.1-201ENST00000404439 358 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC016739.1-201ENST00000405359 345 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RN7SKP56-201ENST00000410513 331 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 CENPIP1-201ENST00000425713 902 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 OR6C71P-201ENST00000432580 913 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC073465.2-201ENST00000440938 498 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RPL12P49-201ENST00000441100 121 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 U3.44-201ENST00000458938 192 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AL157777.1-201ENST00000468100 304 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 RPL32P33-201ENST00000487023 394 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 SNRPCP11-201ENST00000492453 205 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 HMGN1P16-201ENST00000508308 283 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 B4GALNT2P1-201ENST00000508857 307 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 TMEM248P1-201ENST00000510579 951 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 PPBPP1-201ENST00000510807 373 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC005351.1-201ENST00000511152 786 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 IGKV2-36-201ENST00000519999 223 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC122688.1-201ENST00000541494 223 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC139697.1-201ENST00000548429 745 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AL356801.1-201ENST00000559320 294 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AL078601.3-201ENST00000573303 535 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 MIR3690-201ENST00000580266 75 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC2.54□□□□□ -2
LINC01554Q52M75 AL512782.1-201ENST00000603093 364 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 NANOGP3-201ENST00000605855 286 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 AC012557.1-201ENST00000607115 611 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC245014.3-201ENST00000618589 347 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 AC026951.1-201ENST00000559530 2459 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 AC018555.1-201ENST00000567548 1980 ntBASIC2.54□□□□□ -2
LINC01554Q52M75 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LINC01554Q52M75 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01554Q52M75 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
LINC01554Q52M75 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01554Q52M75 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.53□□□□□ -2
LINC01554Q52M75 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01554Q52M75 AL049737.1-201ENST00000413920 1403 ntBASIC2.53□□□□□ -2
LINC01554Q52M75 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01554Q52M75 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC2.53□□□□□ -2
LINC01554Q52M75 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms