Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RPSAP41-201ENST00000439695 860 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 H2AFZP5-201ENST00000446960 382 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC079168.2-201ENST00000453977 416 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC090114.3-201ENST00000479267 829 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC079841.1-201ENST00000481228 950 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC072052.1-201ENST00000496556 306 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC015795.1-201ENST00000513669 327 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 IFITM8P-201ENST00000522529 394 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC004825.1-201ENST00000555068 586 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC011453.2-201ENST00000603737 729 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AL391358.1-201ENST00000605342 190 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AL159169.2-201ENST00000610061 1269 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 CASC19-255ENST00000641733 1385 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC106871.1-201ENST00000568324 3102 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 RNU1-44P-201ENST00000384453 163 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 MIR223-201ENST00000385204 110 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 CENPIP1-201ENST00000425713 902 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 ELOCP18-201ENST00000434209 337 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 HMGB1P16-201ENST00000447155 540 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 RPS27AP15-201ENST00000447672 466 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AL606490.1-201ENST00000452266 765 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC091868.1-201ENST00000508746 304 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC004980.4-201ENST00000513375 203 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 IGKV2D-23-201ENST00000518179 286 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 OR10G5P-201ENST00000532733 358 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 OR11J2P-201ENST00000555298 907 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 FAM27B-201ENST00000610601 213 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 AL442639.1-201ENST00000625030 1899 ntBASIC4.07□□□□□ -1.76
CCDC58Q4VC31 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC58Q4VC31 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 RNA5SP151-201ENST00000365632 117 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 RNU1-82P-201ENST00000390851 165 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 Z98745.1-201ENST00000402553 494 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 RPL7P53-201ENST00000421245 739 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 HLA-N-201ENST00000437516 135 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL935212.3-201ENST00000450729 284 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 ISCUP1-201ENST00000454451 448 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AURKAPS2-201ENST00000454983 333 ntBASIC4.06□□□□□ -1.76
CCDC58Q4VC31 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC58Q4VC31 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms