Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 AL161909.1-201ENST00000397390 712 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 RNU4-64P-201ENST00000410795 131 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 RPL7P33-201ENST00000444159 742 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 LINC02210-201ENST00000444561 288 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 RN7SKP57-201ENST00000517248 293 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 AL031985.2-201ENST00000600955 480 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 AC108738.1-201ENST00000603703 237 ntBASIC4.31□□□□□ -1.72
CACNA1BQ00975 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CACNA1BQ00975 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CACNA1BQ00975 OR52E6-202ENST00000379946 954 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 MIR183-201ENST00000384958 110 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 RAB9AP3-201ENST00000412737 573 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 TMSB10P2-201ENST00000416049 131 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 RAB9AP1-201ENST00000449393 573 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AL691482.1-201ENST00000453255 87 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC069542.2-201ENST00000624816 216 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC027228.2-201ENST00000567141 2154 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 ZFRP1-201ENST00000457579 2970 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AP001642.1-201ENST00000624727 2117 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 IL6STP1-201ENST00000346911 1020 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 MIR128-1-201ENST00000384921 82 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 RNA5SP345-201ENST00000410646 108 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC007688.1-201ENST00000475592 759 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 AP001267.4-201ENST00000602598 545 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 AC011626.1-201ENST00000604710 562 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 AL356608.1-201ENST00000610034 820 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 AL713922.2-201ENST00000619384 716 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1BQ00975 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 TLK1P1-201ENST00000456760 2440 ntBASIC4.3□□□□□ -1.72
CACNA1BQ00975 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.3□□□□□ -1.72
CACNA1BQ00975 MTCO1P46-201ENST00000451639 1491 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 MTND4LP20-201ENST00000402379 270 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 RPS4XP12-201ENST00000461747 709 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 RPL5P24-201ENST00000463742 885 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1BQ00975 HMGN1P9-201ENST00000515212 298 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 RN7SKP67-201ENST00000515905 235 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 RNU1-6P-201ENST00000516290 144 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 AP001804.2-201ENST00000533932 910 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 AP002360.3-201ENST00000607673 710 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1BQ00975 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1BQ00975 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1BQ00975 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNA1BQ00975 AL390316.1-201ENST00000406279 553 ntBASIC4.29□□□□□ -1.72
CACNA1BQ00975 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms