Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 AC108479.2-201ENST00000617314 601 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 MIR7159-201ENST00000620587 66 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 CRYM-AS1-204ENST00000637983 556 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA1P56159 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GFRA1P56159 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 AC018628.1-201ENST00000624147 3819 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 MAPK10-287ENST00000641217 3037 ntBASIC5.69□□□□□ -1.5
GFRA1P56159 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA1P56159 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
GFRA1P56159 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 HSPA8P17-201ENST00000427029 1382 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
GFRA1P56159 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
GFRA1P56159 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
GFRA1P56159 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
GFRA1P56159 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 RN7SKP226-201ENST00000364912 300 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 MIR181A1-201ENST00000385026 110 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 U8.14-201ENST00000390843 143 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 Y_RNA.598-201ENST00000410480 95 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 RN7SKP121-201ENST00000410842 305 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 GSTM3P2-201ENST00000412746 530 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.68□□□□□ -1.5
GFRA1P56159 RPL7AP14-201ENST00000424041 802 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 MTND1P2-201ENST00000430604 821 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC010881.1-201ENST00000433830 235 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.68□□□□□ -1.5
GFRA1P56159 AL590004.3-202ENST00000445883 451 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.68□□□□□ -1.5
GFRA1P56159 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 MTCO1P48-201ENST00000448024 1096 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 MTND6P6-201ENST00000478031 263 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 RPL12P30-201ENST00000488389 499 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.68□□□□□ -1.5
GFRA1P56159 AL358913.1-201ENST00000554342 121 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC006960.3-201ENST00000561845 705 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 LINC00556-201ENST00000569603 412 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 MIR4502-201ENST00000580432 81 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA1P56159 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 BNIP3P30-201ENST00000601184 574 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AP000860.1-201ENST00000605250 559 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC098614.4-201ENST00000607601 462 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AL159169.3-201ENST00000608871 561 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 AC091304.9-201ENST00000612091 226 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AL359535.1-201ENST00000612100 1087 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
GFRA1P56159 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 CR381653.2-201ENST00000624041 768 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 AC073592.6-201ENST00000624271 415 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 CR392039.4-201ENST00000624968 501 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 AC073488.6-201ENST00000632293 754 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 PWAR1-201ENST00000624188 2414 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.68□□□□□ -1.5
GFRA1P56159 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.68□□□□□ -1.5
GFRA1P56159 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 ELF2P3-201ENST00000445099 1506 ntBASIC5.68□□□□□ -1.5
GFRA1P56159 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA1P56159 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA1P56159 AP003486.1-201ENST00000525716 3994 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA1P56159 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA1P56159 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
GFRA1P56159 AC112243.1-201ENST00000623949 3851 ntBASIC5.67□□□□□ -1.5
GFRA1P56159 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms