Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPS26P4-201ENST00000431743 355 ntBASIC4.72□□□□□ -1.65
CDH4P55283 HMGB3P9-201ENST00000441799 583 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH4P55283 TDGF1P1-201ENST00000445734 527 ntBASIC4.72□□□□□ -1.65
CDH4P55283 ARL2BPP10-201ENST00000446487 531 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH4P55283 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 AC022431.1-201ENST00000450941 438 ntBASIC4.72□□□□□ -1.65
CDH4P55283 FCF1P7-201ENST00000451185 558 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC069277.2-201ENST00000454211 432 ntBASIC4.72□□□□□ -1.65
CDH4P55283 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 AK3P4-201ENST00000504283 583 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AK4P6-201ENST00000505168 528 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC093720.1-201ENST00000505681 714 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AP001781.1-201ENST00000530977 207 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 AC015912.2-201ENST00000571053 181 ntBASIC4.72□□□□□ -1.65
CDH4P55283 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
CDH4P55283 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 AL133243.1-201ENST00000614487 366 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AL049536.1-201ENST00000625043 744 ntBASIC4.72□□□□□ -1.65
CDH4P55283 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH4P55283 AC104118.1-201ENST00000607625 1589 ntBASIC4.72□□□□□ -1.65
CDH4P55283 AL132640.2-201ENST00000559968 1698 ntBASIC4.72□□□□□ -1.65
CDH4P55283 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH4P55283 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDH4P55283 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
CDH4P55283 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH4P55283 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH4P55283 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH4P55283 LINC01355-201ENST00000566551 5444 ntBASIC4.71□□□□□ -1.65
CDH4P55283 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH4P55283 OR56B2P-202ENST00000641377 2453 ntBASIC4.71□□□□□ -1.65
CDH4P55283 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.71□□□□□ -1.65
CDH4P55283 AL355852.1-201ENST00000454081 1771 ntBASIC4.71□□□□□ -1.66
CDH4P55283 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 Z98755.1-201ENST00000407015 1384 ntBASIC4.71□□□□□ -1.66
CDH4P55283 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 GLULP6-201ENST00000399502 913 ntBASIC4.71□□□□□ -1.66
CDH4P55283 RPL36AP10-201ENST00000421785 322 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC006065.1-201ENST00000422539 802 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AL935212.3-201ENST00000450729 284 ntBASIC4.71□□□□□ -1.66
CDH4P55283 C1DP3-201ENST00000455013 423 ntBASIC4.71□□□□□ -1.66
CDH4P55283 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 RPL31P53-201ENST00000457065 348 ntBASIC4.71□□□□□ -1.66
CDH4P55283 CYCSP34-201ENST00000458172 304 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC096741.1-201ENST00000472250 846 ntBASIC4.71□□□□□ -1.66
CDH4P55283 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH4P55283 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH4P55283 AC084033.1-201ENST00000550830 633 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH4P55283 AC079075.1-201ENST00000559543 878 ntBASIC4.71□□□□□ -1.66
CDH4P55283 SULT1C2P2-201ENST00000562517 294 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 AC209154.1-201ENST00000582156 337 ntBASIC4.71□□□□□ -1.66
CDH4P55283 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH4P55283 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH4P55283 AC020915.5-201ENST00000596836 964 ntBASIC4.71□□□□□ -1.66
CDH4P55283 SNX6P1-201ENST00000601728 1224 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC005520.3-201ENST00000602874 370 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC100847.1-201ENST00000611316 481 ntBASIC4.71□□□□□ -1.66
CDH4P55283 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH4P55283 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH4P55283 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH4P55283 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDH4P55283 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH4P55283 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CDH4P55283 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH4P55283 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH4P55283 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH4P55283 CASC19-204ENST00000641001 2055 ntBASIC4.7□□□□□ -1.66
CDH4P55283 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.7□□□□□ -1.66
CDH4P55283 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH4P55283 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
CDH4P55283 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH4P55283 MTCYBP7-201ENST00000419540 1134 ntBASIC4.7□□□□□ -1.66
CDH4P55283 RPL21P43-201ENST00000425440 472 ntBASIC4.7□□□□□ -1.66
CDH4P55283 RPL23AP1-201ENST00000428990 471 ntBASIC4.7□□□□□ -1.66
CDH4P55283 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH4P55283 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH4P55283 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
CDH4P55283 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH4P55283 AL031584.1-201ENST00000447169 754 ntBASIC4.7□□□□□ -1.66
CDH4P55283 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms