Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL118508.4-201ENST00000624142 1176 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 CR381572.2-201ENST00000624852 397 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 TLK1P1-201ENST00000456760 2440 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LIMK2P53671 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 AC110792.3-201ENST00000595906 1614 ntBASIC4.78□□□□□ -1.64
LIMK2P53671 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.78□□□□□ -1.64
LIMK2P53671 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LIMK2P53671 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
LIMK2P53671 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 RNU6-398P-201ENST00000384143 109 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 RN7SKP100-201ENST00000411258 284 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC016397.1-201ENST00000412463 242 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 MTND2P11-201ENST00000423638 648 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK2P53671 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK2P53671 NPM1P33-201ENST00000438918 872 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 OR1H1P-201ENST00000448731 937 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.77□□□□□ -1.65
LIMK2P53671 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.77□□□□□ -1.65
LIMK2P53671 RPL23AP37-201ENST00000479658 549 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 NPM1P29-201ENST00000483112 803 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.77□□□□□ -1.65
LIMK2P53671 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK2P53671 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 AP006289.1-201ENST00000538089 277 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC018552.1-201ENST00000562099 811 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 ELOCP28-201ENST00000590044 317 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AF230666.2-201ENST00000602328 725 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC130352.1-201ENST00000602979 661 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 COX6CP4-201ENST00000605798 228 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC092953.2-201ENST00000608000 699 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AC019131.2-201ENST00000609071 870 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 AL354696.1-201ENST00000614652 497 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AP000346.3-201ENST00000622821 210 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 AP000720.1-201ENST00000625091 483 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 TMEM30CP-203ENST00000637814 1035 ntBASIC4.77□□□□□ -1.65
LIMK2P53671 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
LIMK2P53671 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.77□□□□□ -1.65
LIMK2P53671 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LIMK2P53671 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIMK2P53671 MFSD8-216ENST00000641147 4009 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK2P53671 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 RNA5SP191-201ENST00000362585 102 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 MIR421-201ENST00000365696 85 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 SNORD96B-201ENST00000386148 79 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 AC119751.6-201ENST00000416712 186 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AL645608.4-201ENST00000423619 154 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK2P53671 RSL24D1P8-201ENST00000434442 492 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.76□□□□□ -1.65
LIMK2P53671 MTND2P3-201ENST00000452458 470 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK2P53671 AURKAPS2-201ENST00000454983 333 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK2P53671 RN7SL346P-201ENST00000491561 294 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC011005.3-201ENST00000491624 395 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK2P53671 RPS4XP18-201ENST00000495480 763 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK2P53671 OR5AN2P-201ENST00000534535 896 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK2P53671 RN7SL802P-201ENST00000577858 299 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.76□□□□□ -1.65
LIMK2P53671 SNX6P1-201ENST00000601728 1224 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 AC019080.5-201ENST00000624891 757 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.76□□□□□ -1.65
LIMK2P53671 MIR7641-1-201ENST00000627518 61 ntBASIC4.76□□□□□ -1.65
LIMK2P53671 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIMK2P53671 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms