Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.5□□□□□ -1.53
COPB1P53618 RN7SKP59-201ENST00000410520 314 ntBASIC5.5□□□□□ -1.53
COPB1P53618 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPB1P53618 RPL36AP10-201ENST00000421785 322 ntBASIC5.5□□□□□ -1.53
COPB1P53618 DEFB130D-201ENST00000426866 237 ntBASIC5.5□□□□□ -1.53
COPB1P53618 RPL7L1P9-201ENST00000431298 745 ntBASIC5.5□□□□□ -1.53
COPB1P53618 RPS27P18-201ENST00000431701 247 ntBASIC5.5□□□□□ -1.53
COPB1P53618 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.5□□□□□ -1.53
COPB1P53618 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.5□□□□□ -1.53
COPB1P53618 AC073052.1-201ENST00000440417 714 ntBASIC5.5□□□□□ -1.53
COPB1P53618 RPS27P5-201ENST00000444247 244 ntBASIC5.5□□□□□ -1.53
COPB1P53618 Z73417.1-201ENST00000447373 778 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AL606490.1-201ENST00000452266 765 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPB1P53618 RN7SL799P-201ENST00000475891 298 ntBASIC5.5□□□□□ -1.53
COPB1P53618 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 AC090686.1-201ENST00000481577 749 ntBASIC5.5□□□□□ -1.53
COPB1P53618 RPS23P1-201ENST00000491662 432 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.5□□□□□ -1.53
COPB1P53618 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 RNU6-513P-201ENST00000516104 104 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
COPB1P53618 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 UBTFL10-201ENST00000528532 562 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC024940.3-201ENST00000538551 316 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 MRPS36P5-201ENST00000551909 298 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC004825.1-201ENST00000555068 586 ntBASIC5.5□□□□□ -1.53
COPB1P53618 CYCSP40-201ENST00000575927 294 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AC245100.7-201ENST00000609678 442 ntBASIC5.5□□□□□ -1.53
COPB1P53618 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.5□□□□□ -1.53
COPB1P53618 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPB1P53618 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.5□□□□□ -1.53
COPB1P53618 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COPB1P53618 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPB1P53618 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPB1P53618 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.49□□□□□ -1.53
COPB1P53618 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COPB1P53618 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.49□□□□□ -1.53
COPB1P53618 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COPB1P53618 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 RN7SKP162-201ENST00000363605 345 ntBASIC5.49□□□□□ -1.53
COPB1P53618 SNORD56.4-201ENST00000363883 71 ntBASIC5.49□□□□□ -1.53
COPB1P53618 RNU6-31P-201ENST00000384388 108 ntBASIC5.49□□□□□ -1.53
COPB1P53618 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPB1P53618 ATP5HP3-201ENST00000396994 486 ntBASIC5.49□□□□□ -1.53
COPB1P53618 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 RNU2-17P-201ENST00000410290 190 ntBASIC5.49□□□□□ -1.53
COPB1P53618 RN7SKP114-201ENST00000410327 279 ntBASIC5.49□□□□□ -1.53
COPB1P53618 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.49□□□□□ -1.53
COPB1P53618 AC107081.1-201ENST00000414975 361 ntBASIC5.49□□□□□ -1.53
COPB1P53618 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 AC092648.1-201ENST00000425870 423 ntBASIC5.49□□□□□ -1.53
COPB1P53618 RPL34P6-201ENST00000432390 345 ntBASIC5.49□□□□□ -1.53
COPB1P53618 RPS29P9-201ENST00000440360 171 ntBASIC5.49□□□□□ -1.53
COPB1P53618 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.49□□□□□ -1.53
COPB1P53618 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.49□□□□□ -1.53
COPB1P53618 Z83846.1-201ENST00000446798 265 ntBASIC5.49□□□□□ -1.53
COPB1P53618 AC009127.1-201ENST00000467090 155 ntBASIC5.49□□□□□ -1.53
COPB1P53618 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.49□□□□□ -1.53
COPB1P53618 AC138409.2-202ENST00000507274 458 ntBASIC5.49□□□□□ -1.53
COPB1P53618 PGAM1P13-201ENST00000507497 754 ntBASIC5.49□□□□□ -1.53
COPB1P53618 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 EIF4A2P5-201ENST00000529914 499 ntBASIC5.49□□□□□ -1.53
COPB1P53618 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPB1P53618 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.49□□□□□ -1.53
COPB1P53618 BNIP3P24-201ENST00000593398 557 ntBASIC5.49□□□□□ -1.53
COPB1P53618 AC245036.5-201ENST00000596330 847 ntBASIC5.49□□□□□ -1.53
COPB1P53618 GAS5-AS1-201ENST00000602767 694 ntBASIC5.49□□□□□ -1.53
COPB1P53618 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.49□□□□□ -1.53
COPB1P53618 AC011330.2-201ENST00000621680 635 ntBASIC5.49□□□□□ -1.53
COPB1P53618 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COPB1P53618 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.49□□□□□ -1.53
COPB1P53618 NAMPTP1-201ENST00000440465 2514 ntBASIC5.49□□□□□ -1.53
COPB1P53618 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPB1P53618 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 AL355578.1-201ENST00000607405 1328 ntBASIC5.48□□□□□ -1.53
COPB1P53618 AC011493.1-201ENST00000596753 1632 ntBASIC5.48□□□□□ -1.53
COPB1P53618 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPB1P53618 AC008079.2-201ENST00000623543 20396 ntBASIC5.48□□□□□ -1.53
COPB1P53618 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.48□□□□□ -1.53
COPB1P53618 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms