Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.89□□□□□ -1.63
CENPAP49450 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.89□□□□□ -1.63
CENPAP49450 NPM1P47-201ENST00000560843 856 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AC027104.1-201ENST00000563702 681 ntBASIC4.89□□□□□ -1.63
CENPAP49450 CYP2C60P-201ENST00000566088 139 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.89□□□□□ -1.63
CENPAP49450 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.89□□□□□ -1.63
CENPAP49450 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.89□□□□□ -1.63
CENPAP49450 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.89□□□□□ -1.63
CENPAP49450 AC093424.1-201ENST00000604999 338 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AC013468.1-201ENST00000608680 598 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AC116447.1-201ENST00000613153 453 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AP001962.1-201ENST00000624114 559 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.89□□□□□ -1.63
CENPAP49450 AC073869.8-201ENST00000641806 335 ntBASIC4.89□□□□□ -1.63
CENPAP49450 AC092376.2-201ENST00000622621 4116 ntBASIC4.89□□□□□ -1.63
CENPAP49450 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CENPAP49450 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 CASC19-284ENST00000642142 1868 ntBASIC4.89□□□□□ -1.63
CENPAP49450 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 AC073055.1-201ENST00000456901 1621 ntBASIC4.89□□□□□ -1.63
CENPAP49450 SEC63P2-201ENST00000503863 1939 ntBASIC4.89□□□□□ -1.63
CENPAP49450 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 AC104623.2-202ENST00000623477 4002 ntBASIC4.89□□□□□ -1.63
CENPAP49450 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.89□□□□□ -1.63
CENPAP49450 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CENPAP49450 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.89□□□□□ -1.63
CENPAP49450 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 AL592437.2-201ENST00000421655 2434 ntBASIC4.88□□□□□ -1.63
CENPAP49450 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.88□□□□□ -1.63
CENPAP49450 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 RNU6-236P-201ENST00000363886 106 ntBASIC4.88□□□□□ -1.63
CENPAP49450 RN7SKP275-201ENST00000364626 301 ntBASIC4.88□□□□□ -1.63
CENPAP49450 SNORA62.2-201ENST00000364672 152 ntBASIC4.88□□□□□ -1.63
CENPAP49450 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 BTF3P8-201ENST00000414577 526 ntBASIC4.88□□□□□ -1.63
CENPAP49450 RPL6P29-201ENST00000414863 865 ntBASIC4.88□□□□□ -1.63
CENPAP49450 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 RPL34P6-201ENST00000432390 345 ntBASIC4.88□□□□□ -1.63
CENPAP49450 RPL7P29-201ENST00000437151 728 ntBASIC4.88□□□□□ -1.63
CENPAP49450 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 DNAJA1P5-201ENST00000440278 943 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC245047.2-201ENST00000441060 530 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AL591719.1-201ENST00000444669 744 ntBASIC4.88□□□□□ -1.63
CENPAP49450 ARL5AP2-201ENST00000444698 533 ntBASIC4.88□□□□□ -1.63
CENPAP49450 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 RPL7AP52-201ENST00000458096 790 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC110749.1-201ENST00000462007 357 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC068587.2-201ENST00000478386 781 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC104108.1-201ENST00000509930 412 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC016559.2-201ENST00000510759 359 ntBASIC4.88□□□□□ -1.63
CENPAP49450 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 HMGN1P9-201ENST00000515212 298 ntBASIC4.88□□□□□ -1.63
CENPAP49450 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.88□□□□□ -1.63
CENPAP49450 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 CYCSP22-201ENST00000517555 339 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 AC090819.1-201ENST00000523800 1111 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 AC095057.3-201ENST00000567102 1157 ntBASIC4.88□□□□□ -1.63
CENPAP49450 HNRNPCP4-201ENST00000571636 900 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.88□□□□□ -1.63
CENPAP49450 AC125494.3-201ENST00000602759 455 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AL096712.1-201ENST00000614561 159 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC037198.3-201ENST00000616754 526 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AP005431.1-201ENST00000618479 319 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.88□□□□□ -1.63
CENPAP49450 AC129915.3-201ENST00000634128 948 ntBASIC4.88□□□□□ -1.63
CENPAP49450 MIR193BHG-214ENST00000641765 509 ntBASIC4.88□□□□□ -1.63
CENPAP49450 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CENPAP49450 AC235565.1-201ENST00000456962 1325 ntBASIC4.88□□□□□ -1.63
CENPAP49450 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CENPAP49450 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CENPAP49450 AC018529.3-201ENST00000624212 2254 ntBASIC4.88□□□□□ -1.63
CENPAP49450 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CENPAP49450 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 AL049555.1-201ENST00000562834 1933 ntBASIC4.87□□□□□ -1.63
CENPAP49450 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms