Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.62□□□□□ -1.67
HTTP42858 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HTTP42858 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HTTP42858 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
HTTP42858 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.61□□□□□ -1.67
HTTP42858 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 U3.45-201ENST00000607547 219 ntBASIC4.61□□□□□ -1.67
HTTP42858 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 MAPK10-328ENST00000641553 4009 ntBASIC4.61□□□□□ -1.67
HTTP42858 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 OR51H2P-202ENST00000641424 3046 ntBASIC4.61□□□□□ -1.67
HTTP42858 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 NPM1P18-201ENST00000434232 732 ntBASIC4.61□□□□□ -1.67
HTTP42858 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.61□□□□□ -1.67
HTTP42858 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.61□□□□□ -1.67
HTTP42858 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.61□□□□□ -1.67
HTTP42858 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.61□□□□□ -1.67
HTTP42858 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.61□□□□□ -1.67
HTTP42858 RPL5P24-201ENST00000463742 885 ntBASIC4.61□□□□□ -1.67
HTTP42858 HPRT1P2-201ENST00000505250 544 ntBASIC4.61□□□□□ -1.67
HTTP42858 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.61□□□□□ -1.67
HTTP42858 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.61□□□□□ -1.67
HTTP42858 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.61□□□□□ -1.67
HTTP42858 AC010653.1-201ENST00000571108 881 ntBASIC4.61□□□□□ -1.67
HTTP42858 MIR4325-201ENST00000583049 90 ntBASIC4.61□□□□□ -1.67
HTTP42858 AC005972.3-201ENST00000606304 481 ntBASIC4.61□□□□□ -1.67
HTTP42858 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.61□□□□□ -1.67
HTTP42858 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HTTP42858 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
HTTP42858 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.6□□□□□ -1.67
HTTP42858 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.6□□□□□ -1.67
HTTP42858 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HTTP42858 PCNPP4-201ENST00000414817 517 ntBASIC4.6□□□□□ -1.67
HTTP42858 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HTTP42858 KRT19P6-201ENST00000510983 209 ntBASIC4.6□□□□□ -1.67
HTTP42858 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.6□□□□□ -1.67
HTTP42858 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.6□□□□□ -1.67
HTTP42858 MIR6852-201ENST00000621699 66 ntBASIC4.6□□□□□ -1.67
HTTP42858 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HTTP42858 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HTTP42858 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.6□□□□□ -1.67
HTTP42858 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.6□□□□□ -1.67
HTTP42858 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 GTF2IP8-201ENST00000560687 584 ntBASIC4.6□□□□□ -1.67
HTTP42858 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.6□□□□□ -1.67
HTTP42858 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.6□□□□□ -1.67
HTTP42858 AC073530.2-201ENST00000623987 261 ntBASIC4.6□□□□□ -1.67
HTTP42858 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 AC022417.1-201ENST00000624768 1303 ntBASIC4.6□□□□□ -1.67
HTTP42858 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 AL359922.3-201ENST00000624779 1670 ntBASIC4.6□□□□□ -1.67
HTTP42858 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HTTP42858 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.6□□□□□ -1.67
HTTP42858 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 MTND4LP17-201ENST00000414607 293 ntBASIC4.59□□□□□ -1.67
HTTP42858 AC005300.1-201ENST00000428401 373 ntBASIC4.59□□□□□ -1.67
HTTP42858 RN7SKP289-201ENST00000517244 295 ntBASIC4.59□□□□□ -1.67
HTTP42858 RN7SKP57-201ENST00000517248 293 ntBASIC4.59□□□□□ -1.67
HTTP42858 MIR4513-201ENST00000581077 86 ntBASIC4.59□□□□□ -1.67
HTTP42858 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC4.59□□□□□ -1.67
HTTP42858 AL591135.1-201ENST00000401578 5914 ntBASIC4.59□□□□□ -1.67
HTTP42858 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HTTP42858 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HTTP42858 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HTTP42858 RNU1-33P-201ENST00000364249 162 ntBASIC4.59□□□□□ -1.67
HTTP42858 AC004938.1-201ENST00000438468 308 ntBASIC4.59□□□□□ -1.67
HTTP42858 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 AC090686.1-201ENST00000481577 749 ntBASIC4.59□□□□□ -1.67
HTTP42858 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.59□□□□□ -1.67
HTTP42858 AL513477.2-201ENST00000607858 568 ntBASIC4.59□□□□□ -1.67
HTTP42858 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.59□□□□□ -1.67
HTTP42858 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HTTP42858 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms