Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 OR52H2P-201ENST00000514607 902 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 RN7SKP244-201ENST00000516513 307 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 DEFB108A-201ENST00000530110 222 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
HOXC12P31275 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC091489.2-201ENST00000566263 604 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC068135.2-201ENST00000569293 1028 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AP003115.1-201ENST00000569849 463 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 MIR4675-201ENST00000577898 77 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 AL365181.4-201ENST00000609800 547 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AL445647.2-201ENST00000615170 130 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AL354718.1-201ENST00000619764 589 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 RACGAP1P-201ENST00000550663 1879 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 MTND5P26-201ENST00000426018 1752 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 RNU6-462P-201ENST00000362659 105 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AL050335.1-201ENST00000396909 869 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC025750.1-201ENST00000399891 379 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 RPL12P23-201ENST00000405880 490 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 RAP1BP3-201ENST00000407180 549 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 RNA5SP198-201ENST00000410376 127 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 Z97055.1-201ENST00000419730 712 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC12P31275 VN1R20P-201ENST00000425215 966 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 MTCO3P21-201ENST00000430791 643 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC003989.1-201ENST00000434569 565 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 UBE2V1P8-201ENST00000437166 265 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC12P31275 EEF1E1P1-201ENST00000446998 430 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 RPL37P3-201ENST00000456825 293 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 MTCO3P38-201ENST00000468910 766 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 AL358832.1-201ENST00000497800 389 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC093870.1-201ENST00000506837 213 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC12P31275 RNU6-718P-201ENST00000516166 105 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 MED28P5-201ENST00000528254 438 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 OR6C73P-201ENST00000546432 358 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC12P31275 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 CYCSP2-201ENST00000558168 301 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 TPRKBP2-201ENST00000565969 475 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC002310.3-201ENST00000569728 723 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC12P31275 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC115286.1-201ENST00000604298 434 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC12P31275 AL589743.6-201ENST00000611025 117 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 U4.5-201ENST00000617137 123 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AL121890.2-201ENST00000617644 465 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 RBPJP2-201ENST00000618187 1444 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 OR1N1-202ENST00000619659 939 ntBASIC5.78□□□□□ -1.48
HOXC12P31275 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC12P31275 AC061999.1-201ENST00000624454 177 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms