Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC019131.2-201ENST00000609071 870 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC015922.4-201ENST00000612568 690 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMAP28067 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 AL353662.3-201ENST00000625131 237 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMAP28067 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMAP28067 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMAP28067 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.99□□□□□ -1.77
HLA-DMAP28067 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMAP28067 USP9YP4-201ENST00000424401 1745 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 U3.2-201ENST00000362981 210 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 RNU6-304P-201ENST00000364855 107 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AL078604.1-201ENST00000404609 466 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 RNA5SP306-201ENST00000411087 107 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 DPY19L1P2-201ENST00000426647 915 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 RPL31P15-201ENST00000449770 338 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 RN7SL319P-201ENST00000480656 221 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 RPS4XP1-201ENST00000482189 787 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 RN7SL649P-201ENST00000496974 275 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 PGAM1P13-201ENST00000507497 754 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 BX510359.5-201ENST00000515651 304 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 EIF4EP5-201ENST00000528228 640 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AL049779.2-201ENST00000553847 315 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 MIR4716-201ENST00000579628 84 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 MIR4271-201ENST00000582451 67 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC127024.6-201ENST00000621598 424 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 AP002505.2-201ENST00000623585 696 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 AC083899.2-201ENST00000423285 1376 ntBASIC3.98□□□□□ -1.77
HLA-DMAP28067 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DMAP28067 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DMAP28067 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMAP28067 OR11H5P-202ENST00000641612 1325 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMAP28067 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DMAP28067 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 RNA5SP455-201ENST00000365190 119 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AL589647.1-201ENST00000402485 466 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 VN1R12P-201ENST00000403778 876 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 GJA6P-201ENST00000415117 1042 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 BMS1P13-201ENST00000417301 885 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 MTCO3P21-201ENST00000430791 643 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AL163193.1-201ENST00000444895 788 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 HMGB1P16-201ENST00000447155 540 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 NDUFA5P8-201ENST00000449019 346 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 RNU6-1218P-201ENST00000458990 108 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DMAP28067 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms