Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC015795.1-201ENST00000513669 327 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.79□□□□□ -1.8
COL8A2P25067 IGKV2D-10-201ENST00000520194 281 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.79□□□□□ -1.8
COL8A2P25067 OR8G5-201ENST00000524943 1041 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.79□□□□□ -1.8
COL8A2P25067 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC007066.2-202ENST00000566531 914 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC015912.2-201ENST00000571053 181 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 KPNA2P3-201ENST00000584190 848 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AL008729.2-201ENST00000606393 473 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC005962.2-201ENST00000611427 652 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 OR52H1-202ENST00000641796 1061 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 CPHL1P-201ENST00000461341 3407 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 AP001273.1-201ENST00000624493 3152 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL8A2P25067 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL8A2P25067 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
COL8A2P25067 AL049693.1-201ENST00000402760 611 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RAD23BP1-201ENST00000421404 1227 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC234779.1-201ENST00000425910 285 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 NPM1P26-201ENST00000426339 738 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC011998.1-201ENST00000433403 117 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.78□□□□□ -1.8
COL8A2P25067 AL445433.1-201ENST00000457507 257 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 CYCSP34-201ENST00000458172 304 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RNU7-157P-201ENST00000459600 66 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RPS27AP17-201ENST00000463344 455 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC112206.1-201ENST00000468416 477 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC010618.1-201ENST00000469924 477 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RPL21P6-201ENST00000479171 504 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.78□□□□□ -1.8
COL8A2P25067 PRELID3BP5-201ENST00000508612 460 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 HMGB1P19-201ENST00000517578 577 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.78□□□□□ -1.8
COL8A2P25067 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.78□□□□□ -1.8
COL8A2P25067 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.78□□□□□ -1.8
COL8A2P25067 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.78□□□□□ -1.8
COL8A2P25067 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.78□□□□□ -1.8
COL8A2P25067 MIR3138-201ENST00000585238 82 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.78□□□□□ -1.8
COL8A2P25067 AP001160.4-201ENST00000596971 382 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RNF138P2-201ENST00000603490 592 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 COX6CP4-201ENST00000605798 228 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.78□□□□□ -1.8
COL8A2P25067 SNORD91B-202ENST00000608459 222 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 AC097505.1-201ENST00000610199 565 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 AC114781.5-201ENST00000615297 108 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 DHX9P1-201ENST00000436565 3076 ntBASIC3.78□□□□□ -1.8
COL8A2P25067 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.78□□□□□ -1.8
COL8A2P25067 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL8A2P25067 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL8A2P25067 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.78□□□□□ -1.81
COL8A2P25067 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.77□□□□□ -1.81
COL8A2P25067 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL8A2P25067 CASC19-255ENST00000641733 1385 ntBASIC3.77□□□□□ -1.81
COL8A2P25067 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.77□□□□□ -1.81
COL8A2P25067 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL8A2P25067 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.77□□□□□ -1.81
COL8A2P25067 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL8A2P25067 AC090017.1-201ENST00000548612 1779 ntBASIC3.77□□□□□ -1.81
COL8A2P25067 SNORA70.2-201ENST00000364506 135 ntBASIC3.77□□□□□ -1.81
COL8A2P25067 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.77□□□□□ -1.81
COL8A2P25067 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms