Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL590002.1-201ENST00000406554 418 ntBASIC7.24□□□□□ -1.25
RFX1P22670 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 RPL7P30-201ENST00000420888 709 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 RPL23AP28-201ENST00000448062 470 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AL590365.1-201ENST00000450788 243 ntBASIC7.24□□□□□ -1.25
RFX1P22670 RPL7AP71-201ENST00000451120 739 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 IGHV3-57-201ENST00000520143 280 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 AC013828.2-201ENST00000532487 235 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 AC140063.1-201ENST00000541343 259 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX1P22670 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 AP001180.3-201ENST00000582221 145 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AC012368.3-201ENST00000604190 219 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AC010200.2-201ENST00000605098 235 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AL683813.2-201ENST00000605245 502 ntBASIC7.24□□□□□ -1.25
RFX1P22670 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 AC063943.3-201ENST00000615562 356 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AC002553.4-201ENST00000616896 331 ntBASIC7.24□□□□□ -1.25
RFX1P22670 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.24□□□□□ -1.25
RFX1P22670 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 AC027559.1-201ENST00000636288 271 ntBASIC7.24□□□□□ -1.25
RFX1P22670 AL034408.1-201ENST00000637712 664 ntBASIC7.24□□□□□ -1.25
RFX1P22670 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX1P22670 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RFX1P22670 AC097461.1-201ENST00000568928 2821 ntBASIC7.24□□□□□ -1.25
RFX1P22670 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RFX1P22670 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RFX1P22670 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 AC092079.1-201ENST00000558620 1985 ntBASIC7.23□□□□□ -1.25
RFX1P22670 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.23□□□□□ -1.25
RFX1P22670 AC062029.1-202ENST00000606164 3651 ntBASIC7.23□□□□□ -1.25
RFX1P22670 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 OR11H4-201ENST00000315409 1082 ntBASIC7.23□□□□□ -1.25
RFX1P22670 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 TMSB4XP4-201ENST00000323496 618 ntBASIC7.23□□□□□ -1.25
RFX1P22670 GAPDHP24-201ENST00000328713 983 ntBASIC7.23□□□□□ -1.25
RFX1P22670 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 RNA5SP308-201ENST00000362532 115 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 SNRPEP2-201ENST00000397592 279 ntBASIC7.23□□□□□ -1.25
RFX1P22670 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 GSTA9P-201ENST00000406231 611 ntBASIC7.23□□□□□ -1.25
RFX1P22670 CCNG1P1-201ENST00000406783 885 ntBASIC7.23□□□□□ -1.25
RFX1P22670 Y_RNA.608-201ENST00000410647 95 ntBASIC7.23□□□□□ -1.25
RFX1P22670 RN7SKP296-201ENST00000411185 341 ntBASIC7.23□□□□□ -1.25
RFX1P22670 GSTM3P2-201ENST00000412746 530 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC138393.2-201ENST00000414742 246 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 SETP9-201ENST00000423837 832 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.23□□□□□ -1.25
RFX1P22670 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 AL590128.1-201ENST00000433407 286 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 AC073909.1-201ENST00000447112 999 ntBASIC7.23□□□□□ -1.25
RFX1P22670 ARPC3P5-201ENST00000448802 534 ntBASIC7.23□□□□□ -1.25
RFX1P22670 RPL23AP15-201ENST00000450202 459 ntBASIC7.23□□□□□ -1.25
RFX1P22670 UOX-201ENST00000471089 899 ntBASIC7.23□□□□□ -1.25
RFX1P22670 RPL12P31-201ENST00000478433 450 ntBASIC7.23□□□□□ -1.25
RFX1P22670 ACTR3P3-201ENST00000480448 893 ntBASIC7.23□□□□□ -1.25
RFX1P22670 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.23□□□□□ -1.25
RFX1P22670 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 AC098799.2-201ENST00000509466 868 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 SOD1P3-201ENST00000518682 454 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 SNRPCP6-201ENST00000528310 210 ntBASIC7.23□□□□□ -1.25
RFX1P22670 OR5AP1P-201ENST00000529730 940 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC005363.1-201ENST00000530779 351 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.23□□□□□ -1.25
RFX1P22670 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms