Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH1P12830 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH1P12830 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH1P12830 AC005377.1-201ENST00000605126 456 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC112503.1-201ENST00000608436 391 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC016769.4-201ENST00000616893 535 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC084824.4-201ENST00000620106 731 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC126544.2-201ENST00000625174 749 ntBASIC4.82□□□□□ -1.64
CDH1P12830 AC132825.1-201ENST00000463573 2247 ntBASIC4.82□□□□□ -1.64
CDH1P12830 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH1P12830 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 ZNF90P1-201ENST00000480493 1951 ntBASIC4.82□□□□□ -1.64
CDH1P12830 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CDH1P12830 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 AC112255.1-201ENST00000624070 2493 ntBASIC4.81□□□□□ -1.64
CDH1P12830 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH1P12830 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 RNU4-4P-201ENST00000364588 130 ntBASIC4.81□□□□□ -1.64
CDH1P12830 RNU6-354P-201ENST00000383862 107 ntBASIC4.81□□□□□ -1.64
CDH1P12830 RNU6-610P-201ENST00000384264 107 ntBASIC4.81□□□□□ -1.64
CDH1P12830 RN7SKP199-201ENST00000410325 305 ntBASIC4.81□□□□□ -1.64
CDH1P12830 RNU2-22P-201ENST00000411266 212 ntBASIC4.81□□□□□ -1.64
CDH1P12830 Z68694.1-201ENST00000413929 841 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH1P12830 TMBIM7P-201ENST00000418074 855 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC093162.1-201ENST00000419682 124 ntBASIC4.81□□□□□ -1.64
CDH1P12830 EIF4A1P1-201ENST00000420241 934 ntBASIC4.81□□□□□ -1.64
CDH1P12830 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH1P12830 MTCO2P23-201ENST00000425216 680 ntBASIC4.81□□□□□ -1.64
CDH1P12830 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC006994.1-201ENST00000438212 839 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AL137845.2-201ENST00000444292 988 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 RPL7P55-201ENST00000450522 746 ntBASIC4.81□□□□□ -1.64
CDH1P12830 snoU109.3-201ENST00000459477 145 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC104164.3-201ENST00000467363 1258 ntBASIC4.81□□□□□ -1.64
CDH1P12830 CYCSP20-201ENST00000473154 315 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC022795.1-201ENST00000473808 480 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC090686.1-201ENST00000481577 749 ntBASIC4.81□□□□□ -1.64
CDH1P12830 RN7SL808P-201ENST00000496066 299 ntBASIC4.81□□□□□ -1.64
CDH1P12830 OR5H3P-201ENST00000502817 919 ntBASIC4.81□□□□□ -1.64
CDH1P12830 ARL4AP1-201ENST00000503220 705 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC114322.1-201ENST00000506771 926 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH1P12830 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 AC021146.7-201ENST00000509604 775 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC147055.3-201ENST00000510547 851 ntBASIC4.81□□□□□ -1.64
CDH1P12830 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH1P12830 EIF4A2P5-201ENST00000529914 499 ntBASIC4.81□□□□□ -1.64
CDH1P12830 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH1P12830 HMGN2P6-201ENST00000551091 273 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 AL049830.4-201ENST00000555149 351 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH1P12830 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH1P12830 AC008507.2-201ENST00000588402 1176 ntBASIC4.81□□□□□ -1.64
CDH1P12830 BNIP3P38-201ENST00000601117 544 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC069431.2-201ENST00000604149 1099 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 AC021851.1-201ENST00000608537 1082 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC093875.1-201ENST00000623688 504 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AC013437.2-201ENST00000639587 677 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AL596275.2-204ENST00000641628 552 ntBASIC4.81□□□□□ -1.64
CDH1P12830 AL596275.2-206ENST00000641957 626 ntBASIC4.81□□□□□ -1.64
CDH1P12830 HSPD1P14-201ENST00000432666 1618 ntBASIC4.81□□□□□ -1.64
CDH1P12830 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH1P12830 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH1P12830 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH1P12830 CASC19-281ENST00000642118 1554 ntBASIC4.81□□□□□ -1.64
CDH1P12830 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH1P12830 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH1P12830 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH1P12830 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH1P12830 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH1P12830 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CDH1P12830 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH1P12830 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH1P12830 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH1P12830 SNORA73.1-201ENST00000363107 205 ntBASIC4.8□□□□□ -1.64
CDH1P12830 RNU6-252P-201ENST00000363232 107 ntBASIC4.8□□□□□ -1.64
CDH1P12830 RNA5SP428-201ENST00000365129 132 ntBASIC4.8□□□□□ -1.64
CDH1P12830 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH1P12830 SPTLC1P2-201ENST00000407089 121 ntBASIC4.8□□□□□ -1.64
CDH1P12830 RN7SKP278-201ENST00000410504 342 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms