Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AC010329.2-201ENST00000595195 2737 ntBASIC5.02□□□□□ -1.61
PCNAP12004 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.02□□□□□ -1.61
PCNAP12004 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 AC100778.3-201ENST00000580060 1750 ntBASIC5.01□□□□□ -1.61
PCNAP12004 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCNAP12004 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 RNU6-666P-201ENST00000363499 107 ntBASIC5.01□□□□□ -1.61
PCNAP12004 RNA5SP90-201ENST00000364801 99 ntBASIC5.01□□□□□ -1.61
PCNAP12004 U3.25-201ENST00000391209 220 ntBASIC5.01□□□□□ -1.61
PCNAP12004 HMGB3P18-201ENST00000406327 590 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.01□□□□□ -1.61
PCNAP12004 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 CFL1P1-202ENST00000432948 411 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 ARF4P4-201ENST00000439608 520 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 EXOSC3P1-201ENST00000448649 500 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 AL133244.1-201ENST00000456007 258 ntBASIC5.01□□□□□ -1.61
PCNAP12004 DUXAP8-207ENST00000456786 622 ntBASIC5.01□□□□□ -1.61
PCNAP12004 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 OR2AO1P-201ENST00000476497 403 ntBASIC5.01□□□□□ -1.61
PCNAP12004 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 RPL7P39-201ENST00000481157 744 ntBASIC5.01□□□□□ -1.61
PCNAP12004 HPRT1P1-201ENST00000509498 657 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.01□□□□□ -1.61
PCNAP12004 OR7E13P-201ENST00000526052 910 ntBASIC5.01□□□□□ -1.61
PCNAP12004 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 MIR4509-3-201ENST00000578671 94 ntBASIC5.01□□□□□ -1.61
PCNAP12004 MIR4310-201ENST00000582950 57 ntBASIC5.01□□□□□ -1.61
PCNAP12004 MIR4509-2-201ENST00000583920 94 ntBASIC5.01□□□□□ -1.61
PCNAP12004 SS18L2P2-201ENST00000583960 235 ntBASIC5.01□□□□□ -1.61
PCNAP12004 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 FKBP1AP1-201ENST00000594588 318 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AC069307.1-201ENST00000602820 447 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AC079610.2-201ENST00000604818 690 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AP002802.2-201ENST00000605877 235 ntBASIC5.01□□□□□ -1.61
PCNAP12004 DUXAP10-204ENST00000612052 616 ntBASIC5.01□□□□□ -1.61
PCNAP12004 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.01□□□□□ -1.61
PCNAP12004 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.01□□□□□ -1.61
PCNAP12004 AC008147.4-201ENST00000617570 1204 ntBASIC5.01□□□□□ -1.61
PCNAP12004 MIR4509-1-201ENST00000618224 94 ntBASIC5.01□□□□□ -1.61
PCNAP12004 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.01□□□□□ -1.61
PCNAP12004 MIR6837-201ENST00000620884 64 ntBASIC5.01□□□□□ -1.61
PCNAP12004 AC145207.9-201ENST00000623802 325 ntBASIC5.01□□□□□ -1.61
PCNAP12004 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.01□□□□□ -1.61
PCNAP12004 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCNAP12004 AC007996.1-201ENST00000620414 2821 ntBASIC5.01□□□□□ -1.61
PCNAP12004 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCNAP12004 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5□□□□□ -1.61
PCNAP12004 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCNAP12004 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCNAP12004 NEAT1-202ENST00000501122 22743 ntBASIC5□□□□□ -1.61
PCNAP12004 MTCO1P18-201ENST00000455518 1419 ntBASIC5□□□□□ -1.61
PCNAP12004 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5□□□□□ -1.61
PCNAP12004 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5□□□□□ -1.61
PCNAP12004 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5□□□□□ -1.61
PCNAP12004 ASNSP1-201ENST00000518311 1939 ntBASIC5□□□□□ -1.61
PCNAP12004 MAPK10-286ENST00000641208 8747 ntBASIC5□□□□□ -1.61
PCNAP12004 ZNF29P-201ENST00000225587 168 ntBASIC5□□□□□ -1.61
PCNAP12004 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCNAP12004 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCNAP12004 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCNAP12004 RNU5B-1-201ENST00000363286 116 ntBASIC5□□□□□ -1.61
PCNAP12004 RN7SKP160-201ENST00000363804 340 ntBASIC5□□□□□ -1.61
PCNAP12004 RNA5SP435-201ENST00000364044 108 ntBASIC5□□□□□ -1.61
PCNAP12004 AC019155.1-201ENST00000382242 574 ntBASIC5□□□□□ -1.61
PCNAP12004 MIR600-201ENST00000385007 98 ntBASIC5□□□□□ -1.61
PCNAP12004 NCSTNP1-201ENST00000406229 144 ntBASIC5□□□□□ -1.61
PCNAP12004 VN1R51P-201ENST00000411675 945 ntBASIC5□□□□□ -1.61
PCNAP12004 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5□□□□□ -1.61
PCNAP12004 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5□□□□□ -1.61
PCNAP12004 NPM1P4-201ENST00000414095 812 ntBASIC5□□□□□ -1.61
PCNAP12004 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms