Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 TTC39DP-201ENST00000416781 1688 ntBASIC5.24□□□□□ -1.57
CHRNB1P11230 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNB1P11230 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNB1P11230 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNB1P11230 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNB1P11230 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNB1P11230 AL356317.1-201ENST00000396110 1436 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHRNB1P11230 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 RNU6-252P-201ENST00000363232 107 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC234772.1-201ENST00000377927 937 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHRNB1P11230 RNU6-207P-201ENST00000384137 107 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 SNORD65-201ENST00000391079 73 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 TATDN1P1-201ENST00000414123 891 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AL158825.1-201ENST00000414735 521 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 GLUD1P9-201ENST00000420997 1173 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNB1P11230 XKRYP1-201ENST00000423438 492 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AL160175.1-201ENST00000428124 247 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 DNAJC19P7-201ENST00000428811 344 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 XKRYP2-201ENST00000432915 492 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 NPM1P33-201ENST00000438918 872 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC012512.1-201ENST00000446594 718 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 EIF2S2P2-201ENST00000447161 982 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC092691.2-201ENST00000461787 803 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 RPL23AP72-201ENST00000492447 435 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 SUMO1P1-201ENST00000497904 306 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC119751.5-201ENST00000514077 770 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 RNA5SP43-201ENST00000516559 110 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 MORF4L1P3-201ENST00000525966 950 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNB1P11230 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC023538.1-201ENST00000534576 736 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC087888.1-201ENST00000550884 1254 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 AL132857.1-201ENST00000555180 708 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC091042.1-201ENST00000579213 173 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC234772.3-201ENST00000602277 528 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AL022067.1-201ENST00000602426 454 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC015712.7-201ENST00000615211 635 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNB1P11230 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNB1P11230 uc_338.7-201ENST00000621834 124 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC120349.3-201ENST00000624377 529 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 CU459211.1-201ENST00000635667 749 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 AC006927.2-201ENST00000639256 389 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 AP001642.1-201ENST00000624727 2117 ntBASIC5.23□□□□□ -1.57
CHRNB1P11230 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNB1P11230 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB1P11230 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CHRNB1P11230 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNB1P11230 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB1P11230 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB1P11230 AC006206.1-201ENST00000544842 3387 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB1P11230 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB1P11230 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHRNB1P11230 RN7SKP185-201ENST00000362813 326 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 Z97832.1-201ENST00000402490 328 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNB1P11230 AL592310.1-201ENST00000414330 671 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNB1P11230 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNB1P11230 AC068287.1-201ENST00000430283 295 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNB1P11230 MTCO2P20-201ENST00000437339 673 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 AC073465.2-201ENST00000440938 498 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 AL031313.1-201ENST00000448435 256 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 TPT1P12-201ENST00000448968 492 ntBASIC5.22□□□□□ -1.57
CHRNB1P11230 AL591623.2-201ENST00000449978 222 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms