Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.01□□□□□ -1.45
COL3A1P02461 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 AC005951.1-201ENST00000576706 485 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 RPL26P30-202ENST00000602923 645 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 ELOCP35-201ENST00000604289 336 ntBASIC6.01□□□□□ -1.45
COL3A1P02461 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.01□□□□□ -1.45
COL3A1P02461 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL3A1P02461 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL3A1P02461 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL3A1P02461 RNU1-63P-201ENST00000383902 164 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 Z98745.1-201ENST00000402553 494 ntBASIC6□□□□□ -1.45
COL3A1P02461 P2RY10P2-201ENST00000416730 913 ntBASIC6□□□□□ -1.45
COL3A1P02461 COX6CP17-201ENST00000421389 185 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC115285.1-201ENST00000424879 736 ntBASIC6□□□□□ -1.45
COL3A1P02461 NPM1P26-201ENST00000426339 738 ntBASIC6□□□□□ -1.45
COL3A1P02461 NDUFA5P1-201ENST00000433858 341 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6□□□□□ -1.45
COL3A1P02461 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6□□□□□ -1.45
COL3A1P02461 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 RPL23AP24-201ENST00000458203 385 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC020898.1-201ENST00000474167 787 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6□□□□□ -1.45
COL3A1P02461 MTCO3P28-201ENST00000513351 515 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 IGLVIV-65-201ENST00000517313 360 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6□□□□□ -1.45
COL3A1P02461 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6□□□□□ -1.45
COL3A1P02461 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 RN7SL435P-201ENST00000584418 282 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC006116.7-201ENST00000590141 756 ntBASIC6□□□□□ -1.45
COL3A1P02461 BNIP3P24-201ENST00000593398 557 ntBASIC6□□□□□ -1.45
COL3A1P02461 AF129408.1-201ENST00000608767 431 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC234782.5-201ENST00000617723 324 ntBASIC6□□□□□ -1.45
COL3A1P02461 AC068831.8-201ENST00000620171 435 ntBASIC6□□□□□ -1.45
COL3A1P02461 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
COL3A1P02461 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
COL3A1P02461 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL3A1P02461 AC139769.1-204ENST00000472297 1931 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.99□□□□□ -1.45
COL3A1P02461 AL513548.1-201ENST00000562904 1724 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL3A1P02461 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 SNORA62-201ENST00000365493 153 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 USP12PY-201ENST00000427677 1064 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 RPL12P28-201ENST00000430852 489 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 NFYAP1-201ENST00000431953 972 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 RPS3AP54-201ENST00000435535 734 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 TPT1P12-201ENST00000448968 492 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.99□□□□□ -1.45
COL3A1P02461 RPS27AP16-201ENST00000492222 470 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.99□□□□□ -1.45
COL3A1P02461 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.99□□□□□ -1.45
COL3A1P02461 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.99□□□□□ -1.45
COL3A1P02461 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.99□□□□□ -1.45
COL3A1P02461 AC009643.1-201ENST00000532030 391 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.99□□□□□ -1.45
COL3A1P02461 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.99□□□□□ -1.45
COL3A1P02461 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.99□□□□□ -1.45
COL3A1P02461 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.99□□□□□ -1.45
COL3A1P02461 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.99□□□□□ -1.45
COL3A1P02461 AC087752.4-201ENST00000605911 462 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 AC015871.5-202ENST00000623252 701 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 AC016717.3-201ENST00000624730 554 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 AC010608.3-201ENST00000625048 527 ntBASIC5.99□□□□□ -1.45
COL3A1P02461 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.99□□□□□ -1.45
COL3A1P02461 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL3A1P02461 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.99□□□□□ -1.45
COL3A1P02461 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms