Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
LDLRP01130 MIR7641-1-201ENST00000627518 61 ntBASIC4.9□□□□□ -1.63
LDLRP01130 AC074101.1-201ENST00000637861 241 ntBASIC4.9□□□□□ -1.63
LDLRP01130 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LDLRP01130 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
LDLRP01130 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.9□□□□□ -1.63
LDLRP01130 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 HSPA8P17-201ENST00000427029 1382 ntBASIC4.9□□□□□ -1.63
LDLRP01130 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.9□□□□□ -1.63
LDLRP01130 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.9□□□□□ -1.63
LDLRP01130 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LDLRP01130 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 AC126323.6-202ENST00000568092 3511 ntBASIC4.89□□□□□ -1.63
LDLRP01130 MIR16-2-201ENST00000362117 81 ntBASIC4.89□□□□□ -1.63
LDLRP01130 RN7SKP104-201ENST00000362605 328 ntBASIC4.89□□□□□ -1.63
LDLRP01130 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LDLRP01130 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.89□□□□□ -1.63
LDLRP01130 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 AL354692.1-201ENST00000423044 315 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 USP9YP9-201ENST00000429406 715 ntBASIC4.89□□□□□ -1.63
LDLRP01130 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 MOB1AP2-201ENST00000446060 614 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 AL157827.1-201ENST00000447622 132 ntBASIC4.89□□□□□ -1.63
LDLRP01130 HMGN1P5-201ENST00000448591 263 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.89□□□□□ -1.63
LDLRP01130 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 AC058823.1-201ENST00000485315 474 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC073073.1-201ENST00000493920 463 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 AC010374.2-201ENST00000512933 535 ntBASIC4.89□□□□□ -1.63
LDLRP01130 RAB9BP1-201ENST00000519581 626 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 AC068339.2-201ENST00000534395 618 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.89□□□□□ -1.63
LDLRP01130 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 AC005341.1-201ENST00000571086 708 ntBASIC4.89□□□□□ -1.63
LDLRP01130 RBM22P1-201ENST00000578589 1214 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.89□□□□□ -1.63
LDLRP01130 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 AC084373.1-201ENST00000603311 235 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC090527.3-201ENST00000619041 548 ntBASIC4.89□□□□□ -1.63
LDLRP01130 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 RPL23AP61-201ENST00000623642 466 ntBASIC4.89□□□□□ -1.63
LDLRP01130 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
LDLRP01130 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LDLRP01130 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LDLRP01130 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
LDLRP01130 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.89□□□□□ -1.63
LDLRP01130 NEAT1-202ENST00000501122 22743 ntBASIC4.89□□□□□ -1.63
LDLRP01130 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDLRP01130 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.88□□□□□ -1.63
LDLRP01130 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDLRP01130 OR4K17-201ENST00000315543 1032 ntBASIC4.88□□□□□ -1.63
LDLRP01130 SNORA17.1-201ENST00000362945 126 ntBASIC4.88□□□□□ -1.63
LDLRP01130 RNVU1-6-201ENST00000364688 164 ntBASIC4.88□□□□□ -1.63
LDLRP01130 BMS1P3-201ENST00000372011 932 ntBASIC4.88□□□□□ -1.63
LDLRP01130 RNU1-149P-201ENST00000390870 161 ntBASIC4.88□□□□□ -1.63
LDLRP01130 AC104297.1-201ENST00000393779 870 ntBASIC4.88□□□□□ -1.63
LDLRP01130 HSPA8P15-201ENST00000401676 786 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms