Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 MIR4301-201ENST00000577203 66 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC010608.2-201ENST00000624830 470 ntBASIC1.91□□□□□ -2.1
USH2AO75445 OR5BE1P-202ENST00000641168 1176 ntBASIC1.91□□□□□ -2.1
USH2AO75445 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 CROT-204ENST00000442291 1993 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 CASC19-261ENST00000641853 1638 ntBASIC1.91□□□□□ -2.1
USH2AO75445 RNU6-304P-201ENST00000364855 107 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AL035696.2-201ENST00000407941 709 ntBASIC1.91□□□□□ -2.1
USH2AO75445 RNA5SP293-201ENST00000410527 113 ntBASIC1.91□□□□□ -2.1
USH2AO75445 UBDP1-202ENST00000457888 382 ntBASIC1.91□□□□□ -2.1
USH2AO75445 RNA5SP246-201ENST00000458909 119 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 AC090312.1-201ENST00000580637 348 ntBASIC1.91□□□□□ -2.1
USH2AO75445 OR7A19P-201ENST00000608051 733 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AL031119.1-201ENST00000404707 1879 ntBASIC1.91□□□□□ -2.1
USH2AO75445 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 MED23-203ENST00000368058 4576 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 PRO1804-201ENST00000623780 2050 ntBASIC1.91□□□□□ -2.1
USH2AO75445 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AP000580.1-201ENST00000404439 358 ntBASIC1.91□□□□□ -2.1
USH2AO75445 VN1R37P-201ENST00000419096 748 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC009506.2-201ENST00000420635 840 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 AC025750.2-201ENST00000442609 450 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC025164.1-201ENST00000496249 478 ntBASIC1.91□□□□□ -2.1
USH2AO75445 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 ATE1-AS1-202ENST00000636460 506 ntBASIC1.91□□□□□ -2.1
USH2AO75445 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AC011503.2-201ENST00000594230 1500 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 ABCC13-202ENST00000463099 3842 ntBASIC1.91□□□□□ -2.1
USH2AO75445 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 RAD17P2-201ENST00000451754 1977 ntBASIC1.91□□□□□ -2.1
USH2AO75445 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AC016772.1-201ENST00000444170 1261 ntBASIC1.91□□□□□ -2.1
USH2AO75445 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC1.91□□□□□ -2.1
USH2AO75445 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.91□□□□□ -2.1
USH2AO75445 RPL23AP97-201ENST00000568955 471 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AP005019.3-201ENST00000620418 560 ntBASIC1.91□□□□□ -2.1
USH2AO75445 AC009120.7-201ENST00000623452 780 ntBASIC1.91□□□□□ -2.1
USH2AO75445 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
USH2AO75445 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH2AO75445 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
USH2AO75445 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
USH2AO75445 AC008065.1-201ENST00000428525 348 ntBASIC1.9□□□□□ -2.1
USH2AO75445 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC1.9□□□□□ -2.1
USH2AO75445 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.9□□□□□ -2.1
USH2AO75445 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.9□□□□□ -2.1
USH2AO75445 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC1.9□□□□□ -2.1
USH2AO75445 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC1.9□□□□□ -2.1
USH2AO75445 AC116553.2-201ENST00000564203 463 ntBASIC1.9□□□□□ -2.1
USH2AO75445 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC1.9□□□□□ -2.1
USH2AO75445 MIR7106-201ENST00000612419 65 ntBASIC1.9□□□□□ -2.1
USH2AO75445 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
USH2AO75445 AC006065.6-201ENST00000625201 545 ntBASIC1.9□□□□□ -2.1
USH2AO75445 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms