Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SULT1C2P2-201ENST00000562517 294 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX4O60224 AC023825.1-201ENST00000566704 1030 ntBASIC4.67□□□□□ -1.66
SSX4O60224 MIR4700-201ENST00000578311 74 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC011840.5-201ENST00000582125 771 ntBASIC4.67□□□□□ -1.66
SSX4O60224 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX4O60224 AC008507.2-201ENST00000588402 1176 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 AC096553.1-201ENST00000605169 829 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC024940.4-201ENST00000605507 246 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC244107.2-201ENST00000611773 76 ntBASIC4.67□□□□□ -1.66
SSX4O60224 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SSX4O60224 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 AL132640.2-201ENST00000559968 1698 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX4O60224 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSX4O60224 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 AC063976.2-201ENST00000425667 3556 ntBASIC4.66□□□□□ -1.66
SSX4O60224 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSX4O60224 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.66□□□□□ -1.66
SSX4O60224 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 RNA5SP183-201ENST00000362452 119 ntBASIC4.66□□□□□ -1.66
SSX4O60224 RNA5SP27-201ENST00000363839 119 ntBASIC4.66□□□□□ -1.66
SSX4O60224 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSX4O60224 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.66□□□□□ -1.66
SSX4O60224 AP000357.1-201ENST00000409926 1165 ntBASIC4.66□□□□□ -1.66
SSX4O60224 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
SSX4O60224 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.66□□□□□ -1.66
SSX4O60224 EIF4A1P1-201ENST00000420241 934 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 AC093422.3-201ENST00000428506 305 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC090018.1-201ENST00000434369 367 ntBASIC4.66□□□□□ -1.66
SSX4O60224 FTH1P16-201ENST00000435241 552 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AL772161.1-201ENST00000439130 476 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 RPL31P44-201ENST00000447680 377 ntBASIC4.66□□□□□ -1.66
SSX4O60224 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
SSX4O60224 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 SCARNA16.4-201ENST00000516956 187 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 AC022832.1-201ENST00000530718 645 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX4O60224 RN7SL622P-201ENST00000585292 275 ntBASIC4.66□□□□□ -1.66
SSX4O60224 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 ZNF92P3-201ENST00000596594 954 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.66□□□□□ -1.66
SSX4O60224 AL137072.1-201ENST00000603444 466 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC105148.1-201ENST00000604961 409 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC104763.3-201ENST00000613765 618 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC073569.3-201ENST00000619055 682 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 AP000648.2-201ENST00000624182 404 ntBASIC4.66□□□□□ -1.66
SSX4O60224 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 AC004808.1-201ENST00000627671 721 ntBASIC4.66□□□□□ -1.66
SSX4O60224 AC074101.1-201ENST00000637861 241 ntBASIC4.66□□□□□ -1.66
SSX4O60224 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 AC073869.8-201ENST00000641806 335 ntBASIC4.66□□□□□ -1.66
SSX4O60224 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSX4O60224 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSX4O60224 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX4O60224 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX4O60224 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SSX4O60224 AC011493.1-201ENST00000596753 1632 ntBASIC4.65□□□□□ -1.66
SSX4O60224 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSX4O60224 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SSX4O60224 LINC01963-201ENST00000562038 3148 ntBASIC4.65□□□□□ -1.66
SSX4O60224 OR9G4-201ENST00000302957 984 ntBASIC4.65□□□□□ -1.67
SSX4O60224 U8.4-201ENST00000363626 134 ntBASIC4.65□□□□□ -1.67
SSX4O60224 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX4O60224 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX4O60224 SNORA67-201ENST00000384423 137 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms