Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC074276.2-201ENST00000619891 348 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC140113.4-201ENST00000622087 222 ntBASIC4.55□□□□□ -1.68
LSM1O15116 AC011815.3-201ENST00000624194 473 ntBASIC4.55□□□□□ -1.68
LSM1O15116 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.55□□□□□ -1.68
LSM1O15116 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LSM1O15116 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
LSM1O15116 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LSM1O15116 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
LSM1O15116 SYT14P1-202ENST00000600441 1448 ntBASIC4.55□□□□□ -1.68
LSM1O15116 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LSM1O15116 AC092079.1-201ENST00000558620 1985 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC134882.1-201ENST00000603738 1676 ntBASIC4.54□□□□□ -1.68
LSM1O15116 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LSM1O15116 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.54□□□□□ -1.68
LSM1O15116 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LSM1O15116 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LSM1O15116 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LSM1O15116 AL031119.1-201ENST00000404707 1879 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC007342.7-201ENST00000624610 2337 ntBASIC4.54□□□□□ -1.68
LSM1O15116 OR56B2P-201ENST00000317102 954 ntBASIC4.54□□□□□ -1.68
LSM1O15116 OR51B3P-201ENST00000412287 913 ntBASIC4.54□□□□□ -1.68
LSM1O15116 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
LSM1O15116 BX119904.1-201ENST00000432026 348 ntBASIC4.54□□□□□ -1.68
LSM1O15116 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LSM1O15116 CYCSP11-201ENST00000436426 315 ntBASIC4.54□□□□□ -1.68
LSM1O15116 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.54□□□□□ -1.68
LSM1O15116 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.54□□□□□ -1.68
LSM1O15116 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.54□□□□□ -1.68
LSM1O15116 AC234781.3-201ENST00000452540 973 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC005532.2-201ENST00000467154 373 ntBASIC4.54□□□□□ -1.68
LSM1O15116 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.54□□□□□ -1.68
LSM1O15116 RWDD4P1-201ENST00000488019 565 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC146944.2-203ENST00000502493 354 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC139495.1-202ENST00000513164 354 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.54□□□□□ -1.68
LSM1O15116 RNU6-319P-201ENST00000516025 108 ntBASIC4.54□□□□□ -1.68
LSM1O15116 MORF4L1P3-201ENST00000525966 950 ntBASIC4.54□□□□□ -1.68
LSM1O15116 NPM1P35-201ENST00000533043 868 ntBASIC4.54□□□□□ -1.68
LSM1O15116 GCSHP4-201ENST00000538792 439 ntBASIC4.54□□□□□ -1.68
LSM1O15116 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.54□□□□□ -1.68
LSM1O15116 AC068446.3-201ENST00000555285 382 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.54□□□□□ -1.68
LSM1O15116 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.54□□□□□ -1.68
LSM1O15116 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.54□□□□□ -1.68
LSM1O15116 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.54□□□□□ -1.68
LSM1O15116 AC008638.3-201ENST00000603341 463 ntBASIC4.54□□□□□ -1.68
LSM1O15116 SUMO2P15-201ENST00000604285 278 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC117490.2-201ENST00000610042 594 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC004825.2-201ENST00000616634 455 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.54□□□□□ -1.68
LSM1O15116 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LSM1O15116 IQCB2P-201ENST00000401788 1633 ntBASIC4.54□□□□□ -1.68
LSM1O15116 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.53□□□□□ -1.68
LSM1O15116 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LSM1O15116 ZFRP1-201ENST00000457579 2970 ntBASIC4.53□□□□□ -1.68
LSM1O15116 BX005019.1-201ENST00000561881 1810 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
LSM1O15116 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.53□□□□□ -1.68
LSM1O15116 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 AL158073.1-201ENST00000426848 1104 ntBASIC4.53□□□□□ -1.68
LSM1O15116 PPIAP13-201ENST00000434706 478 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC092647.3-201ENST00000443044 633 ntBASIC4.53□□□□□ -1.68
LSM1O15116 EEF1B2P5-201ENST00000444820 548 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.53□□□□□ -1.68
LSM1O15116 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 AC026348.1-201ENST00000462549 1053 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC008953.1-201ENST00000497334 318 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.53□□□□□ -1.68
LSM1O15116 RNU1-6P-201ENST00000516290 144 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LSM1O15116 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.53□□□□□ -1.68
LSM1O15116 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.53□□□□□ -1.68
LSM1O15116 AC069240.1-201ENST00000548774 375 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC133555.2-201ENST00000550213 292 ntBASIC4.53□□□□□ -1.68
LSM1O15116 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.53□□□□□ -1.68
LSM1O15116 AL139395.1-201ENST00000603662 160 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC138473.1-201ENST00000605717 526 ntBASIC4.53□□□□□ -1.68
LSM1O15116 EIF3FP1-201ENST00000613970 806 ntBASIC4.53□□□□□ -1.68
LSM1O15116 RMST_5.1-201ENST00000618704 126 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC004232.3-201ENST00000622977 525 ntBASIC4.53□□□□□ -1.68
LSM1O15116 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LSM1O15116 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.53□□□□□ -1.68
LSM1O15116 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
LSM1O15116 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LSM1O15116 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms