Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TPTE2P3-201ENST00000441562 1189 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 BX842559.2-201ENST00000451418 605 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 CDC42P1-201ENST00000456658 548 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AL133445.1-201ENST00000467051 452 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 RN7SL809P-201ENST00000482040 297 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 NIFKP7-201ENST00000503365 834 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 RNA5SP362-201ENST00000516048 118 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RNA5SP230-201ENST00000517039 122 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXN3O00409 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXN3O00409 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXN3O00409 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXN3O00409 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 DPRXP4-201ENST00000578053 568 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RN7SL708P-201ENST00000580952 299 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC123767.1-202ENST00000620407 817 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXN3O00409 AL355480.1-201ENST00000629041 99 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 CYP4F35P-202ENST00000636121 390 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC074101.1-201ENST00000637861 241 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
FOXN3O00409 ZNF663P-202ENST00000641770 1131 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC092747.4-201ENST00000620519 1861 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FOXN3O00409 AL355578.1-201ENST00000607405 1328 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 U3.3-201ENST00000362986 216 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 RNU6-1339P-201ENST00000363574 91 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 AL021331.1-201ENST00000402817 582 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC092634.2-201ENST00000428146 1010 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 FAM96AP1-201ENST00000430879 482 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 RPL7L1P9-201ENST00000431298 745 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 CBX1P4-201ENST00000439415 457 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 RPS11P7-201ENST00000442125 465 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AL929288.2-201ENST00000446368 407 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC091959.2-201ENST00000477363 321 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC068587.2-201ENST00000478386 781 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AL049874.2-201ENST00000492636 288 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC104109.1-201ENST00000498563 436 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC091860.1-201ENST00000505723 432 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 snoU109.6-201ENST00000516831 118 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 IGLVIV-64-201ENST00000518581 301 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 MTCO1P40-201ENST00000574371 625 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXN3O00409 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 AP001542.2-201ENST00000593141 364 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 BNIP3P4-201ENST00000604946 565 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC093424.1-201ENST00000604999 338 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC024060.1-201ENST00000607052 494 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 FAM72A-208ENST00000607379 1139 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 MIR7973-1-201ENST00000614683 76 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 AC004777.1-201ENST00000624317 287 ntBASIC5.6□□□□□ -1.51
FOXN3O00409 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXN3O00409 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXN3O00409 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXN3O00409 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms