Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BX284632.1-201ENST00000478218 541 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 PCNAP1-201ENST00000505363 709 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 GTF2F2P1-201ENST00000511083 675 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM1O00151 IGLV2-28-201ENST00000520681 304 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC026616.1-201ENST00000523157 525 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC012339.2-201ENST00000523996 453 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC022832.1-201ENST00000530718 645 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM1O00151 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 KATNBL1P1-201ENST00000605192 748 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC012467.1-201ENST00000607740 256 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC016769.4-201ENST00000616893 535 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AC018445.2-201ENST00000622987 260 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AP002505.2-201ENST00000623585 696 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 AL118508.4-201ENST00000624142 1176 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM1O00151 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDLIM1O00151 AP001002.1-201ENST00000625148 1513 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM1O00151 AL359922.3-201ENST00000624779 1670 ntBASIC4.61□□□□□ -1.67
PDLIM1O00151 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM1O00151 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PDLIM1O00151 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.6□□□□□ -1.67
PDLIM1O00151 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM1O00151 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
PDLIM1O00151 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDLIM1O00151 U8.4-201ENST00000363626 134 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 RN7SKP113-201ENST00000363891 295 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 U3.36-201ENST00000408418 213 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 SNORA77-201ENST00000408716 125 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 MTCYBP7-201ENST00000419540 1134 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 MTND2P11-201ENST00000423638 648 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM1O00151 RPL7P4-203ENST00000430239 730 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AL157884.3-201ENST00000448273 1184 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 OTX2P1-201ENST00000450956 354 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AL133477.1-201ENST00000457472 514 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC110749.1-201ENST00000462007 357 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 RPL23AP65-201ENST00000475608 468 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 SYT14P1-201ENST00000481459 721 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM1O00151 snoU109.6-201ENST00000516831 118 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AC026688.1-201ENST00000520639 1168 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM1O00151 HAUS8P1-201ENST00000549005 542 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 OR11J2P-201ENST00000555298 907 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.6□□□□□ -1.67
PDLIM1O00151 AC011447.4-201ENST00000587562 111 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC104687.2-201ENST00000604442 342 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 SDR42E1P1-201ENST00000611327 477 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 AC023509.5-201ENST00000617434 807 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 AC067852.7-201ENST00000623270 535 ntBASIC4.6□□□□□ -1.67
PDLIM1O00151 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.6□□□□□ -1.67
PDLIM1O00151 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PDLIM1O00151 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDLIM1O00151 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM1O00151 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PDLIM1O00151 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM1O00151 RNU4-7P-201ENST00000364758 141 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM1O00151 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PDLIM1O00151 SNORA70.10-201ENST00000384515 134 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 NCSTNP1-201ENST00000406229 144 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 RN7SKP278-201ENST00000410504 342 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AMD1P2-201ENST00000412936 992 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.59□□□□□ -1.67
PDLIM1O00151 GJA6P-201ENST00000415117 1042 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AL512504.1-201ENST00000415494 778 ntBASIC4.59□□□□□ -1.67
PDLIM1O00151 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms