Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNU6-709P-201ENST00000517257 104 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP001542.1-201ENST00000591314 200 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL133338.2-201ENST00000604292 736 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL590392.1-201ENST00000604960 446 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 MIR6716-201ENST00000613413 80 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL133243.1-201ENST00000614487 366 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNU4-39P-201ENST00000362455 127 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNA5SP28-201ENST00000363841 119 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL672167.2-201ENST00000377164 879 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 U3.22-201ENST00000391120 215 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC233289.1-201ENST00000403700 508 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL592293.2-201ENST00000422292 996 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RSL24D1P6-201ENST00000426934 401 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC073052.1-201ENST00000440417 714 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC073587.1-201ENST00000447093 876 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL5P16-201ENST00000471467 790 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 GLRXP2-201ENST00000555594 321 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 BNIP3P5-201ENST00000562290 498 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC084783.1-201ENST00000565846 910 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC100847.1-201ENST00000611316 481 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 MLECP1-201ENST00000615893 709 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC004232.3-201ENST00000622977 525 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC138627.1-204ENST00000641894 765 ntBASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.53□□□□□ -1.68
TMX2-CTNND1H3BSU7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC108467.2-201ENST00000617640 1597 ntBASIC4.53□□□□□ -1.69
TMX2-CTNND1H3BSU7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 RGS17P1-201ENST00000423358 553 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR9N1P-201ENST00000491296 333 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC025164.1-201ENST00000496249 478 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC097505.1-201ENST00000610199 565 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL022401.1-201ENST00000619498 108 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC009643.2-201ENST00000603543 1448 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC091046.3-201ENST00000631455 1574 ntBASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMX2-CTNND1H3BSU7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 SEPT7P8-201ENST00000413308 775 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms