Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTNNA3Q9UI47 AC000123.3-201ENST00000624029 4975 ntBASIC5.59□□□□□ -1.52
CTNNA3Q9UI47 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.59□□□□□ -1.52
CTNNA3Q9UI47 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.59□□□□□ -1.52
CTNNA3Q9UI47 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTNNA3Q9UI47 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 LINC01109-201ENST00000603837 3081 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC006967.1-201ENST00000467608 589 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC108751.2-201ENST00000469993 231 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 RPL21P6-201ENST00000479171 504 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 DEFB109F-201ENST00000491870 277 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 IGBP1P5-201ENST00000507524 1000 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 PARP1P2-201ENST00000556806 195 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC233280.2-201ENST00000603917 1070 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 IMMP1LP1-201ENST00000605170 488 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC079298.2-201ENST00000623885 459 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC005332.5-201ENST00000591222 2919 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC104118.1-201ENST00000607625 1589 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 AC120338.1-201ENST00000625074 1541 ntBASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA3Q9UI47 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 SNORA70.2-201ENST00000364506 135 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 RPL7L1P1-201ENST00000448259 785 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC007537.2-201ENST00000472093 511 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC021146.3-201ENST00000511911 260 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 TCP11X3P-202ENST00000514289 1254 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC136624.4-201ENST00000573044 370 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC209154.1-201ENST00000582156 337 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 AL359757.1-201ENST00000623176 255 ntBASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CTNNA3Q9UI47 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 OR56B2P-201ENST00000317102 954 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 IL6STP1-201ENST00000346911 1020 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RNU1-94P-201ENST00000362627 173 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 SNORA68.2-201ENST00000391263 128 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RPL5P19-201ENST00000404228 893 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 ATG4AP1-201ENST00000416893 538 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 TDGF1P1-201ENST00000445734 527 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC108463.1-201ENST00000450258 347 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RPL10P17-201ENST00000453852 316 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AL133244.1-201ENST00000456007 258 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 STRADBP1-201ENST00000478954 1281 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RPL23AP72-201ENST00000492447 435 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 RPL36AP41-201ENST00000493820 306 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC098799.3-201ENST00000506095 438 ntBASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.56□□□□□ -1.52
CTNNA3Q9UI47 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms