Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 TBCAP1-201ENST00000436520 327 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 SERPINA7P1-201ENST00000443077 631 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN11AQ9UI33 MIR3158-1-201ENST00000583596 81 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 AC025175.1-201ENST00000606482 759 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 MIR8069-1-201ENST00000616627 86 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 MIR8069-2-201ENST00000621412 86 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 AC004777.1-201ENST00000624317 287 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 AL731532.2-201ENST00000623542 1953 ntBASIC5.59□□□□□ -1.51
SCN11AQ9UI33 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
SCN11AQ9UI33 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.59□□□□□ -1.52
SCN11AQ9UI33 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCN11AQ9UI33 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.59□□□□□ -1.52
SCN11AQ9UI33 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AL358178.1-201ENST00000407698 397 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 RPS3AP25-201ENST00000411660 793 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AL358232.1-201ENST00000448030 501 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 NPM1P41-201ENST00000512920 831 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AL161729.3-201ENST00000603533 673 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AC099676.1-201ENST00000608886 657 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 AL353726.1-201ENST00000614041 1000 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 ZNF402P-201ENST00000404435 3100 ntBASIC5.58□□□□□ -1.52
SCN11AQ9UI33 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN11AQ9UI33 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AMZ2P2-201ENST00000406819 1057 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AL590806.1-201ENST00000415818 853 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AF213884.1-201ENST00000488102 463 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AL160290.3-201ENST00000604869 165 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 MT-RNR1-201ENST00000389680 954 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 MIR670-201ENST00000390142 98 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 TRAV35-201ENST00000390462 330 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 TPT1P2-201ENST00000413105 503 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 MRPL50P1-201ENST00000431951 384 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 RPL35AP15-201ENST00000468042 339 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 NPM1P28-201ENST00000492269 840 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 RPS4XP18-201ENST00000495480 763 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 KCTD9P2-201ENST00000512203 1013 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 HMGB2P1-201ENST00000591146 634 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AC027228.2-201ENST00000567141 2154 ntBASIC5.57□□□□□ -1.52
SCN11AQ9UI33 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN11AQ9UI33 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AP001002.1-201ENST00000625148 1513 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 VN1R34P-201ENST00000447387 883 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 VN1R32P-201ENST00000452234 905 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 ATP1B1P1-201ENST00000509767 915 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 FTH1P21-201ENST00000512179 511 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AC087499.8-201ENST00000578406 226 ntBASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.56□□□□□ -1.52
SCN11AQ9UI33 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms