Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 RPL23AP72-201ENST00000492447 435 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 SUMO1P1-201ENST00000497904 306 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 RAB9BP1-201ENST00000519581 626 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 UBTFL9-201ENST00000534504 1148 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 MIR4472-2-201ENST00000582069 67 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC209154.1-201ENST00000582156 337 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC067838.1-201ENST00000606064 577 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC112503.2-201ENST00000609005 552 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 MIR6780A-201ENST00000615089 68 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC023510.2-201ENST00000622162 746 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 AC092159.4-201ENST00000624944 550 ntBASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC6Q9UBN7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 SAMMSON-226ENST00000642089 1582 ntBASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HDAC6Q9UBN7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 SNORA2.3-201ENST00000383920 135 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 HMGB3P7-201ENST00000400214 611 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 FABP12P1-201ENST00000401911 322 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AL021331.1-201ENST00000402817 582 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 RPS16P5-201ENST00000406501 404 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 RN7SKP97-201ENST00000410966 333 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 TATDN1P1-201ENST00000414123 891 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AL606495.1-201ENST00000422100 813 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 MTND4LP13-201ENST00000425022 298 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 MTCYBP29-201ENST00000436327 1006 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 RPL36AP15-201ENST00000444514 266 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AL513533.1-201ENST00000453728 415 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 RN7SKP34-201ENST00000516142 244 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC138701.1-201ENST00000524329 714 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AL391358.1-201ENST00000605342 190 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AP001033.2-201ENST00000609701 1003 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 AC022960.3-201ENST00000619794 441 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 CASC19-261ENST00000641853 1638 ntBASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC6Q9UBN7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 RNA5SP223-201ENST00000365174 120 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 VDAC2P1-201ENST00000399358 958 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 U3.32-201ENST00000408116 212 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 SNORA77-201ENST00000408716 125 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 RAB28P1-201ENST00000411517 641 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 RPL26P37-201ENST00000411983 438 ntBASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.57□□□□□ -1.52
HDAC6Q9UBN7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms