Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ADAD1P2-201ENST00000588476 646 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AP001160.4-201ENST00000596971 382 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AC005034.4-201ENST00000603612 899 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.28□□□□□ -1.73
CCDC88CQ9P219 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC012078.1-201ENST00000405035 1646 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AL158163.1-201ENST00000603915 1649 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 ZNF137P-201ENST00000456718 1920 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC021146.4-201ENST00000309229 279 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 NPM1P26-201ENST00000426339 738 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC105137.1-201ENST00000484355 562 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 RNA5SP464-201ENST00000516251 108 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 RPL21P7-201ENST00000557463 483 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AL356218.2-201ENST00000605264 187 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AC241377.1-201ENST00000619797 406 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 AL353684.1-201ENST00000622677 1120 ntBASIC4.27□□□□□ -1.73
CCDC88CQ9P219 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC88CQ9P219 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC067945.1-201ENST00000342609 618 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 RPS26P2-201ENST00000440331 348 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC053481.1-201ENST00000467217 306 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 FKBP1BP1-201ENST00000553366 325 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 MUC2-202ENST00000613187 4845 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 SNORA62-201ENST00000365493 153 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 SNORA57.1-201ENST00000391227 145 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC114755.5-201ENST00000447760 831 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AP000942.1-201ENST00000463969 747 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC008958.1-201ENST00000511047 682 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 SETP1-201ENST00000556014 845 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC069366.1-201ENST00000583159 838 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AC005962.2-201ENST00000611427 652 ntBASIC4.26□□□□□ -1.73
CCDC88CQ9P219 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC88CQ9P219 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC083843.3-201ENST00000623679 2186 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC120036.2-201ENST00000509729 1474 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 RNA5SP515-201ENST00000364570 118 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC88CQ9P219 AC097374.1-203ENST00000400783 485 ntBASIC4.25□□□□□ -1.73
CCDC88CQ9P219 ST13P16-201ENST00000401760 781 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms