Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RNA5SP472-201ENST00000363868 119 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 SNORA22B-201ENST00000383876 138 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 GAPDHP57-201ENST00000424400 585 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RPL5P34-201ENST00000426545 891 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC007559.1-201ENST00000428736 355 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 DYNLL1P7-201ENST00000429273 258 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RPL36AP53-201ENST00000432891 316 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AL022324.2-201ENST00000434827 780 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RPL14P5-201ENST00000436474 730 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 HMGB1P18-201ENST00000438801 619 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 PSPC1P2-201ENST00000455130 225 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RBMY2EP-202ENST00000456360 940 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC023194.1-201ENST00000493084 308 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 MTND5P4-201ENST00000514978 288 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 OR8A2P-201ENST00000528631 952 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC107982.1-201ENST00000507171 1300 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 NMD3P1-201ENST00000439704 1488 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RAD17P2-201ENST00000451754 1977 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 Y_RNA.184-201ENST00000363884 108 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 U3.14-201ENST00000365363 227 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RNU1-39P-201ENST00000383897 165 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RPL23AP47-201ENST00000408017 460 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 MIR1302-3-201ENST00000408128 138 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 NPM1P40-201ENST00000412758 733 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 Z82198.3-201ENST00000421145 199 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL359633.1-201ENST00000421403 310 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL645937.1-202ENST00000421799 937 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL590399.4-201ENST00000436561 601 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 IFNA20P-201ENST00000436840 528 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP000936.3-201ENST00000438127 255 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL935212.3-201ENST00000450729 284 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RPSAP7-201ENST00000456871 885 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL162395.1-201ENST00000457882 422 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL456P-201ENST00000469290 295 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 SNRPCP11-201ENST00000492453 205 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL306P-201ENST00000492941 296 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC112204.1-201ENST00000502591 103 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 PGAM4P2-201ENST00000512491 721 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-416P-201ENST00000516265 103 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 RNU2-46P-201ENST00000517038 113 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP003084.1-201ENST00000524828 742 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AP001189.2-201ENST00000527320 189 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC068790.5-201ENST00000602741 355 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC103710.3-201ENST00000608157 948 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC009268.2-201ENST00000621925 457 ntBASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CUEDC1Q9NWM3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms