Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AP001893.2-201ENST00000526949 202 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC026956.1-201ENST00000558741 396 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 HMGB1P33-201ENST00000563485 527 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC020916.2-201ENST00000591242 360 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 MIR132-201ENST00000591554 101 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC005261.5-201ENST00000596280 355 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC004805.3-201ENST00000603178 310 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC019193.2-201ENST00000610012 634 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC055764.2-201ENST00000610089 670 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC135507.2-201ENST00000612443 309 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC009159.1-201ENST00000618386 642 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC005858.3-201ENST00000624756 589 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 Y_RNA.160-201ENST00000363677 92 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 SUGT1P1-201ENST00000379514 476 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL356057.2-201ENST00000403318 432 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 GSTA9P-201ENST00000406231 611 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 SNORA11D-201ENST00000408548 128 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 SNORA11E-201ENST00000408778 128 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 RANP6-201ENST00000413691 644 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 RPS27AP14-201ENST00000422868 454 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC009362.1-201ENST00000427253 406 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 TIMM9P3-201ENST00000428659 274 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 PGBD4P3-201ENST00000440731 581 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 MORF4-201ENST00000447135 971 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC010307.1-201ENST00000467206 836 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 RN7SL868P-201ENST00000485915 303 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC106760.2-201ENST00000504159 619 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 MTCO3P9-201ENST00000506989 781 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC048346.1-201ENST00000510247 144 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 RNU6-885P-201ENST00000516607 104 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 Y_RNA.701-201ENST00000516812 110 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 RNA5SP135-201ENST00000517019 125 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 HMGB1P23-201ENST00000518743 568 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC138832.1-201ENST00000522871 556 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC136777.2-201ENST00000522979 358 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSU72Q9NP77 MIR548Y-201ENST00000582739 110 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.23□□□□□ -1.41
SSU72Q9NP77 AL589863.1-201ENST00000595383 631 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 DYNLL1P1-201ENST00000595442 269 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 BNIP3P8-201ENST00000597863 560 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 MLECP1-201ENST00000615893 709 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC104010.1-201ENST00000616889 150 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC243756.2-201ENST00000618406 463 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 AC019278.1-201ENST00000623516 479 ntBASIC6.23□□□□□ -1.41
SSU72Q9NP77 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms