Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC138393.1-206ENST00000540997 1886 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC073136.1-201ENST00000449426 2884 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 SNORA74A-201ENST00000364089 198 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNU4-24P-201ENST00000364565 139 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNU4-4P-201ENST00000364588 130 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 MIR143-201ENST00000385300 106 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNF10P1-201ENST00000418589 369 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 TIMM9P2-201ENST00000419324 266 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 MTND6P12-201ENST00000428247 522 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 PCBP2P1-201ENST00000437262 977 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL161722.1-201ENST00000446972 1032 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 MRPL42P4-201ENST00000453267 443 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RANP1-206ENST00000455094 651 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 UBFD1P1-201ENST00000473259 814 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL136038.1-201ENST00000497246 351 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNA5SP438-201ENST00000516561 112 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RNU6-232P-201ENST00000517144 64 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC122688.1-201ENST00000541494 223 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 DUXAP1-201ENST00000556632 463 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC044913.1-201ENST00000557200 430 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC090616.2-202ENST00000584248 222 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC068790.7-201ENST00000602347 528 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC135507.1-201ENST00000607214 561 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC211433.2-201ENST00000608433 387 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 SDR42E1P1-201ENST00000611327 477 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC013562.2-201ENST00000611632 603 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC122133.1-201ENST00000613964 233 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC091931.1-201ENST00000623488 728 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
AMBRA1Q9C0C7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 GTF2H2B-203ENST00000508065 1432 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 ADAM5-202ENST00000399789 1942 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 RNU6-560P-201ENST00000364007 108 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 RNU6-304P-201ENST00000364855 107 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 MIR937-201ENST00000401271 86 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 AC092745.2-202ENST00000411880 369 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 MRPL53P1-201ENST00000414323 319 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 NANOGP4-201ENST00000427230 913 ntBASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.23□□□□□ -1.57
AMBRA1Q9C0C7 YWHAZP7-201ENST00000436906 631 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms