Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SNORD56.6-201ENST00000384569 71 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL596448.1-201ENST00000415024 392 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 RPS3P2-201ENST00000421346 701 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC007161.1-204ENST00000423039 460 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 RPL23AP19-201ENST00000436229 369 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AP000936.3-201ENST00000438127 255 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL008629.1-201ENST00000438615 184 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AZGP1P2-201ENST00000454506 345 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC118282.2-201ENST00000508739 374 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AP000859.1-201ENST00000525536 307 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AP000926.4-201ENST00000527351 454 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 DUXAP6-201ENST00000553858 601 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL049872.1-201ENST00000556323 322 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 MIR4660-201ENST00000583549 74 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 VN1R84P-201ENST00000593697 235 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC100767.2-201ENST00000604840 693 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC025574.2-201ENST00000615621 514 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC023509.5-201ENST00000617434 807 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 MIR6778-201ENST00000617912 73 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 SAMMSON-209ENST00000641222 1100 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AC092376.2-201ENST00000622621 4116 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 AP005435.3-201ENST00000531260 3198 ntBASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM54Q9BYV2 BX005019.1-201ENST00000561881 1810 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC006042.3-201ENST00000454684 1469 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 RNA5SP510-201ENST00000364697 99 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 RNU6-83P-201ENST00000384568 112 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SFR1P1-201ENST00000403720 688 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SNORA11.3-201ENST00000408471 128 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SDHDP6-201ENST00000414693 480 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 MTND2P18-201ENST00000419962 1030 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL662874.1-201ENST00000426065 230 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 NANOGP4-201ENST00000427230 913 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC002069.1-201ENST00000429649 1159 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL031663.1-201ENST00000437445 219 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 TPTE2P6-202ENST00000445572 1007 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 MYO5BP2-201ENST00000449815 1277 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC022431.1-201ENST00000450941 438 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 NECAP1P2-201ENST00000455668 727 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ANKRD26P4-201ENST00000455755 950 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ATG12P2-201ENST00000456830 416 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 RPL7AP52-201ENST00000458096 790 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AL035404.1-201ENST00000497982 568 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC098799.3-201ENST00000506095 438 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 FABP5P12-201ENST00000515543 389 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SNORA70.11-201ENST00000515987 138 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 SNORA70.13-201ENST00000516116 138 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 RNA5SP230-201ENST00000517039 122 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 TRIM51DP-201ENST00000529746 596 ntBASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM54Q9BYV2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms