Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR5D2P-201ENST00000524390 911 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AL445487.1-201ENST00000415694 1580 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCAPERQ9BY12 AC104623.2-202ENST00000623477 4002 ntBASIC6.71□□□□□ -1.34
SCAPERQ9BY12 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 SNORA11C-201ENST00000408532 129 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 RPL7P2-201ENST00000427639 268 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 MRPL50P1-201ENST00000431951 384 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 AC007389.2-201ENST00000434630 306 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 AL049840.6-202ENST00000603373 279 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 MFSD8-242ENST00000641690 4199 ntBASIC6.7□□□□□ -1.34
SCAPERQ9BY12 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCAPERQ9BY12 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 HMGB3P5-201ENST00000428894 612 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AL445584.1-201ENST00000431451 330 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 FTH1P21-201ENST00000512179 511 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AC105233.3-201ENST00000531125 744 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AC012442.3-202ENST00000636742 206 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 AC106871.1-201ENST00000568324 3102 ntBASIC6.69□□□□□ -1.34
SCAPERQ9BY12 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SCAPERQ9BY12 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 AL590806.1-201ENST00000415818 853 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 RPL6P5-201ENST00000445678 828 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 RPS20P4-201ENST00000461659 355 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 RPS27AP17-201ENST00000463344 455 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 NPM1P21-201ENST00000513394 762 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 AC087477.6-201ENST00000559595 843 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 RNU4-89P-201ENST00000607443 133 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 AL445363.3-201ENST00000623080 671 ntBASIC6.68□□□□□ -1.34
SCAPERQ9BY12 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCAPERQ9BY12 RPS3AP25-201ENST00000411660 793 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC114495.1-201ENST00000441274 436 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC012671.1-201ENST00000451912 203 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 TVP23BP1-201ENST00000557500 617 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC103968.1-201ENST00000557841 573 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 CYCSP40-201ENST00000575927 294 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 BPIFA4P-203ENST00000603168 689 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AL354984.3-201ENST00000604803 325 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC015914.2-201ENST00000618167 288 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC015804.1-201ENST00000622935 435 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 AC063952.1-203ENST00000634410 658 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 RLIMP1-201ENST00000339626 1680 ntBASIC6.67□□□□□ -1.34
SCAPERQ9BY12 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SCAPERQ9BY12 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms