Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
IFT140Q96RY7 SNX18P3-202ENST00000565670 1750 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AL138820.1-201ENST00000617901 5305 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AL929601.4-201ENST00000613011 1341 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
IFT140Q96RY7 PGBD4P4-201ENST00000509673 613 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 RNA5SP73-201ENST00000516744 108 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 ZNF415P1-201ENST00000582279 1166 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
IFT140Q96RY7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
IFT140Q96RY7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC015967.1-201ENST00000619893 476 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
IFT140Q96RY7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 AL450345.1-202ENST00000605741 3881 ntBASIC7.23□□□□□ -1.25
IFT140Q96RY7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
IFT140Q96RY7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
IFT140Q96RY7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
IFT140Q96RY7 RNA5SP453-201ENST00000362503 119 ntBASIC7.23□□□□□ -1.25
IFT140Q96RY7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 CYCSP24-201ENST00000445119 316 ntBASIC7.23□□□□□ -1.25
IFT140Q96RY7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 ADAD1P2-201ENST00000588476 646 ntBASIC7.23□□□□□ -1.25
IFT140Q96RY7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.23□□□□□ -1.25
IFT140Q96RY7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 CASC19-261ENST00000641853 1638 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 AC007529.1-201ENST00000418574 2178 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 AC092451.3-201ENST00000625067 1343 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 AP001002.1-201ENST00000625148 1513 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 NDUFB4P4-201ENST00000404822 243 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 AC007738.1-201ENST00000413892 348 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 AC092647.1-201ENST00000420654 287 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 UBE2V1P3-201ENST00000439651 417 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 ATP5G1P3-201ENST00000463301 410 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 ACTR3P3-201ENST00000480448 893 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 CYCSP40-201ENST00000575927 294 ntBASIC7.22□□□□□ -1.25
IFT140Q96RY7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
IFT140Q96RY7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
IFT140Q96RY7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
IFT140Q96RY7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
IFT140Q96RY7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
IFT140Q96RY7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.21□□□□□ -1.25
IFT140Q96RY7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
IFT140Q96RY7 ADAM24P-201ENST00000398655 2101 ntBASIC7.21□□□□□ -1.26
IFT140Q96RY7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 CKS1BP6-201ENST00000424932 240 ntBASIC7.21□□□□□ -1.26
IFT140Q96RY7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 RNA5SP497-201ENST00000516081 97 ntBASIC7.21□□□□□ -1.26
IFT140Q96RY7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 AP000648.2-201ENST00000624182 404 ntBASIC7.21□□□□□ -1.26
IFT140Q96RY7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
IFT140Q96RY7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
IFT140Q96RY7 AL022323.4-201ENST00000623980 13120 ntBASIC7.2□□□□□ -1.26
IFT140Q96RY7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
IFT140Q96RY7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
IFT140Q96RY7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
IFT140Q96RY7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 AC068533.1-201ENST00000418542 415 ntBASIC7.2□□□□□ -1.26
IFT140Q96RY7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
IFT140Q96RY7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.2□□□□□ -1.26
IFT140Q96RY7 AC073346.2-201ENST00000624724 2058 ntBASIC7.2□□□□□ -1.26
IFT140Q96RY7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms