Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ATP5LP3-201ENST00000514223 304 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC023632.1-201ENST00000518463 375 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 MIR3912-201ENST00000577566 105 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AL021707.7-201ENST00000607991 416 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AP000238.1-201ENST00000608759 426 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC010632.3-201ENST00000611377 369 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC122108.2-201ENST00000611946 526 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC092140.2-201ENST00000618027 521 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AC067852.7-201ENST00000623270 535 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 AP005435.3-201ENST00000531260 3198 ntBASIC5.08□□□□□ -1.6
CTHRC1Q96CG8 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 BMS1P3-201ENST00000372011 932 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 OR3A2-201ENST00000408891 1076 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 RN7SKP222-201ENST00000410651 315 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL365203.2-201ENST00000423444 196 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 SRSF1P1-201ENST00000424058 520 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL390023.1-201ENST00000428836 262 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC090018.1-201ENST00000434369 367 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 MTND2P40-201ENST00000436718 841 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC009263.1-201ENST00000441193 1239 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 MRPL42P4-201ENST00000453267 443 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC026348.1-201ENST00000462549 1053 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 RPL7L1P4-201ENST00000513004 707 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 IGKV2D-10-201ENST00000520194 281 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC010306.1-201ENST00000523223 1117 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AP000769.2-201ENST00000602344 396 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC245008.1-201ENST00000608123 476 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC000068.2-201ENST00000608816 460 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC011939.3-201ENST00000613686 466 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC105227.2-201ENST00000615075 605 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC090246.1-201ENST00000616499 426 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AC022509.4-201ENST00000621404 572 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 AP003497.2-201ENST00000624220 967 ntBASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTHRC1Q96CG8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms