Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 MAPK10-357ENST00000641831 2858 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 LINC01613-201ENST00000561476 2780 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AC007485.2-201ENST00000623493 1667 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC102941.1-201ENST00000567616 1537 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 ZNF652P1-201ENST00000442420 1309 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
HLA-CQ95604 SNORA51.1-201ENST00000363243 140 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 RNA5SP512-201ENST00000364550 120 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 Y_RNA.339-201ENST00000365325 102 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.39□□□□□ -1.23
HLA-CQ95604 PRELID1P1-201ENST00000403549 660 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 RNU6-985P-201ENST00000410182 104 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 RN7SKP206-201ENST00000410823 293 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.39□□□□□ -1.23
HLA-CQ95604 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AC073415.1-201ENST00000449240 153 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 HMGN3P1-201ENST00000453847 193 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC026410.2-201ENST00000460281 156 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC098583.1-201ENST00000480875 255 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AP001025.2-201ENST00000490908 477 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC104136.1-201ENST00000512969 394 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AC021001.1-201ENST00000518703 987 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 OR4C7P-201ENST00000533375 919 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.39□□□□□ -1.23
HLA-CQ95604 MIR4502-201ENST00000580432 81 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 RPL29P33-201ENST00000587474 316 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC098848.2-201ENST00000588023 330 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 AC007938.3-201ENST00000604965 623 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AC244517.12-201ENST00000623581 663 ntBASIC7.39□□□□□ -1.23
HLA-CQ95604 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
HLA-CQ95604 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HLA-CQ95604 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
HLA-CQ95604 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
HLA-CQ95604 ASNSP3-201ENST00000451989 1306 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 Y_RNA.301-201ENST00000364990 103 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC087752.1-201ENST00000391360 558 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AL139805.1-201ENST00000407837 289 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 Y_RNA.615-201ENST00000410769 117 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC078974.1-201ENST00000411597 223 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AL354890.1-201ENST00000413730 346 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AC110602.1-201ENST00000437414 318 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 SETP20-201ENST00000457046 852 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 RN7SL283P-201ENST00000489055 303 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 RPL19P11-201ENST00000495944 589 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 IGLVI-42-201ENST00000522485 381 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.38□□□□□ -1.23
HLA-CQ95604 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.38□□□□□ -1.23
HLA-CQ95604 AL138895.2-201ENST00000603019 178 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 AC004241.2-201ENST00000614562 444 ntBASIC7.38□□□□□ -1.23
HLA-CQ95604 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
HLA-CQ95604 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms