Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC006963.1-201ENST00000624003 1052 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 AC135068.5-201ENST00000624197 983 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 NLRP3P1-201ENST00000622303 1785 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 HSPA8P17-201ENST00000427029 1382 ntBASIC5.28□□□□□ -1.56
HMGB4Q8WW32 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGB4Q8WW32 HSPA8P14-201ENST00000552265 1805 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC073055.1-201ENST00000456901 1621 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 OR51B3P-201ENST00000412287 913 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 DPPA2P2-201ENST00000418220 897 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 OR51A6P-201ENST00000418680 1004 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC092634.2-201ENST00000428146 1010 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 MTATP6P17-201ENST00000431030 672 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 GTF2IP3-201ENST00000433887 494 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 KRT8P51-201ENST00000438938 274 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 RPS29P10-201ENST00000439197 166 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC098826.2-201ENST00000452011 651 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 SEPT7P3-201ENST00000455017 621 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 RPL7P32-201ENST00000457119 744 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 HMGN2P25-201ENST00000486956 268 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 RN7SL591P-201ENST00000496150 292 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC008837.1-201ENST00000511513 412 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC119751.1-201ENST00000513357 765 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 HMGB1P1-201ENST00000522557 636 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AP000859.1-201ENST00000525536 307 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC137768.1-201ENST00000549998 553 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC140725.3-201ENST00000616193 880 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC074140.1-201ENST00000621617 208 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 AC135068.12-201ENST00000637370 931 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.27□□□□□ -1.57
HMGB4Q8WW32 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HMGB4Q8WW32 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AC097461.1-201ENST00000568928 2821 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AL133268.1-201ENST00000405676 1401 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 AL078599.1-201ENST00000402075 293 ntBASIC5.26□□□□□ -1.57
HMGB4Q8WW32 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGB4Q8WW32 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms