Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.381-201ENST00000365666 102 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 Y_RNA.394-201ENST00000383942 103 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MIR199B-201ENST00000384849 110 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL807761.1-201ENST00000417622 171 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MTND2P23-201ENST00000422990 651 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 GSTA6P-201ENST00000424144 582 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 SRIP2-201ENST00000428470 166 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC119618.1-201ENST00000434191 222 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC108039.2-201ENST00000440214 359 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL049734.2-201ENST00000441066 616 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 HSPE1P28-201ENST00000443139 211 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RPS26P56-201ENST00000444468 240 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RPL31P15-201ENST00000449770 338 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL121877.1-201ENST00000453704 622 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL19P-201ENST00000462522 306 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 UOX-201ENST00000471089 899 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC087385.2-201ENST00000477729 498 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RPL23AP41-201ENST00000484754 458 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL445187.1-201ENST00000502685 260 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 NPM1P41-201ENST00000512920 831 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC022616.3-201ENST00000523940 148 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MIR3137-201ENST00000577367 75 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MIR5705-201ENST00000579870 89 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC090415.1-201ENST00000581877 847 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AP001120.4-201ENST00000590231 108 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC113139.1-201ENST00000605049 239 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 BX323046.1-201ENST00000610145 535 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC022106.2-201ENST00000620114 757 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AL353898.2-201ENST00000623000 255 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC069222.1-201ENST00000608028 3360 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 AC140479.2-201ENST00000421567 3130 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 SMG1P7-201ENST00000565246 2704 ntBASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.77□□□□□ -1.33
DEPDC4Q8N2C3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 XPOTP1-201ENST00000443317 2398 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MAPK10-383ENST00000642032 3390 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RNA5SP394-201ENST00000364216 119 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RNA5SP355-201ENST00000365317 135 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 Y_RNA.419-201ENST00000384041 102 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MIR181C-201ENST00000384881 110 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RGS17P1-201ENST00000423358 553 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MED15P9-201ENST00000424716 533 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 ATP5JP1-201ENST00000431631 322 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC000362.1-201ENST00000433725 425 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 BNIP3P2-201ENST00000441221 577 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC079781.2-201ENST00000446424 169 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MED28P7-201ENST00000456611 530 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RPS4XP19-201ENST00000460237 736 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 CEACAMP3-202ENST00000483806 638 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms