Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 XKRYP5-201ENST00000449659 483 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AL358876.1-201ENST00000453364 1075 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 RPL35AP19-201ENST00000469425 329 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 RN7SL717P-201ENST00000478343 297 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC069304.1-201ENST00000491593 704 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 GLUD1P3-202ENST00000508551 200 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 OR5H4P-201ENST00000510851 923 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC073544.2-201ENST00000601155 540 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AP000769.2-201ENST00000602344 396 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC005021.1-201ENST00000608730 355 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 VN1R74P-201ENST00000613259 503 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC244258.1-201ENST00000637553 1071 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC068137.3-201ENST00000639191 341 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC073869.6-201ENST00000640656 341 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 LINC01963-201ENST00000562038 3148 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC012020.1-201ENST00000624541 1728 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 RN7SKP124-201ENST00000364730 341 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 RNU5E-4P-201ENST00000364931 120 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 RN7SKP81-201ENST00000365603 331 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 MIR551A-201ENST00000385042 96 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 Z75741.2-201ENST00000417272 1167 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL049610.1-201ENST00000423374 372 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 CENPIP1-201ENST00000425713 902 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 HIGD1AP12-201ENST00000427832 281 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 MRPS10P2-201ENST00000431226 381 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 NDUFB4P8-201ENST00000435351 367 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 RAB9AP5-201ENST00000437794 597 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC092641.1-201ENST00000440229 772 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL391987.1-201ENST00000441025 200 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 RAB9AP2-201ENST00000443911 597 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL606662.1-201ENST00000445763 553 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 CCRL1P1-201ENST00000449542 1053 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC026348.1-201ENST00000462549 1053 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 IGLVIV-64-201ENST00000518581 301 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 KCTD9P6-201ENST00000522306 950 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AP002963.1-201ENST00000530590 184 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL133241.1-201ENST00000556832 487 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC087481.2-201ENST00000565492 330 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AP003973.1-201ENST00000604639 691 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms