Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 SNORA26.10-201ENST00000516427 141 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 BRD9P1-201ENST00000529855 560 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AP001033.2-201ENST00000609701 1003 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC009229.4-201ENST00000623854 1947 ntBASIC5.18□□□□□ -1.58
PRPF39Q86UA1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF39Q86UA1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 RNA5SP443-201ENST00000363083 132 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 SNORA2.3-201ENST00000383920 135 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 RNU6-317P-201ENST00000384031 107 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 SNORA51.8-201ENST00000384234 132 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 UBE2V1P11-201ENST00000411559 285 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 CBX1P4-201ENST00000439415 457 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL353093.1-201ENST00000441292 436 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL589765.3-201ENST00000446084 462 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC069540.1-201ENST00000446320 988 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC017099.1-201ENST00000448261 1028 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 PPIAP21-201ENST00000464473 501 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 CCDC75P1-201ENST00000469247 791 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC105031.1-201ENST00000518550 476 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 VTA1P2-201ENST00000520205 911 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 OR5AZ1P-201ENST00000527448 943 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL136520.1-202ENST00000555494 763 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 MIR4480-201ENST00000582492 71 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 ZNF92P3-201ENST00000596594 954 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC104785.1-201ENST00000603220 588 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AL512506.1-201ENST00000613918 449 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 AC015908.5-201ENST00000623289 343 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 MAPK10-263ENST00000641052 4307 ntBASIC5.17□□□□□ -1.58
PRPF39Q86UA1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF39Q86UA1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AL512283.1-201ENST00000606756 1384 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC011447.7-201ENST00000624228 1590 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC104260.2-201ENST00000623551 3497 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms