Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC008079.2-201ENST00000623543 20396 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 AC009313.2-201ENST00000417893 1941 ntBASIC5.33□□□□□ -1.56
SNX30Q5VWJ9 GTF2H2B-203ENST00000508065 1432 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC096656.1-201ENST00000623826 1364 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC008432.1-201ENST00000615912 1320 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 RNA5SP428-201ENST00000365129 132 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 RNA5SP455-201ENST00000365190 119 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 SNORA51.8-201ENST00000384234 132 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 RNU4-27P-201ENST00000410889 139 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AL353093.1-201ENST00000441292 436 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC099063.2-201ENST00000446360 662 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 RN7SL443P-201ENST00000464331 290 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC104629.1-201ENST00000494226 508 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 RNA5SP43-201ENST00000516559 110 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 NMNAT1P1-201ENST00000554095 876 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC068714.1-201ENST00000559623 800 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 NPM1P47-201ENST00000560843 856 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC011487.3-201ENST00000593607 453 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC105254.2-201ENST00000603636 436 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC005084.1-201ENST00000605160 304 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC011374.2-201ENST00000607135 526 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AL133445.2-201ENST00000611191 527 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AC011815.3-201ENST00000624194 473 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AP002967.1-201ENST00000624203 539 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 AL138960.2-201ENST00000625145 535 ntBASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX30Q5VWJ9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 STX3-208ENST00000641815 3236 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 RN7SKP95-201ENST00000362860 303 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 Z97832.1-201ENST00000402490 328 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC009302.1-201ENST00000417147 390 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL512661.1-201ENST00000434586 1253 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 OR7E125P-201ENST00000443450 846 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL589765.3-201ENST00000446084 462 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 RPL31P44-201ENST00000447680 377 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AP000942.1-201ENST00000463969 747 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 RPL23AP12-201ENST00000467573 473 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 RN7SL441P-201ENST00000492388 296 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC104229.1-201ENST00000561364 255 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL390726.5-202ENST00000564800 256 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 VN1R84P-201ENST00000593697 235 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 MEMO1P5-201ENST00000604810 406 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC112503.2-201ENST00000609005 552 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 MIR7973-1-201ENST00000614683 76 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC018926.1-201ENST00000616335 435 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL445528.2-201ENST00000620582 470 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AL353662.3-201ENST00000625131 237 ntBASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SNX30Q5VWJ9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms