Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AL139148.1-201ENST00000427122 680 ntBASIC3.95□□□□□ -1.78
USF2Q15853 RPS4XP16-201ENST00000427198 791 ntBASIC3.95□□□□□ -1.78
USF2Q15853 COX6CP13-201ENST00000428703 226 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.95□□□□□ -1.78
USF2Q15853 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 AC104306.1-201ENST00000449702 371 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AC007386.1-201ENST00000455212 582 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.95□□□□□ -1.78
USF2Q15853 AC023141.9-201ENST00000458734 412 ntBASIC3.95□□□□□ -1.78
USF2Q15853 EIF2S2P4-201ENST00000461070 984 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AC015864.1-201ENST00000496512 544 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC010374.1-201ENST00000503762 1237 ntBASIC3.95□□□□□ -1.78
USF2Q15853 RPS4XP20-201ENST00000505751 772 ntBASIC3.95□□□□□ -1.78
USF2Q15853 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 GTF2F2P1-201ENST00000511083 675 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AC022616.2-201ENST00000523185 300 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.95□□□□□ -1.78
USF2Q15853 AC025857.1-201ENST00000525252 377 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.95□□□□□ -1.78
USF2Q15853 AGGF1P9-201ENST00000561884 913 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC007225.2-201ENST00000562529 256 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.95□□□□□ -1.78
USF2Q15853 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 AL355816.1-201ENST00000607951 118 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AP005432.2-201ENST00000608162 586 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 AC109309.2-201ENST00000612597 332 ntBASIC3.95□□□□□ -1.78
USF2Q15853 AL359513.1-201ENST00000614364 557 ntBASIC3.95□□□□□ -1.78
USF2Q15853 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.95□□□□□ -1.78
USF2Q15853 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.95□□□□□ -1.78
USF2Q15853 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
USF2Q15853 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.95□□□□□ -1.78
USF2Q15853 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.95□□□□□ -1.78
USF2Q15853 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.95□□□□□ -1.78
USF2Q15853 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 SNORA2.3-201ENST00000383920 135 ntBASIC3.94□□□□□ -1.78
USF2Q15853 RNA5SP104-201ENST00000410989 118 ntBASIC3.94□□□□□ -1.78
USF2Q15853 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.94□□□□□ -1.78
USF2Q15853 AC093655.2-201ENST00000425735 631 ntBASIC3.94□□□□□ -1.78
USF2Q15853 SKP1P3-201ENST00000429280 487 ntBASIC3.94□□□□□ -1.78
USF2Q15853 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.94□□□□□ -1.78
USF2Q15853 EXTL2P1-201ENST00000446218 416 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.94□□□□□ -1.78
USF2Q15853 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.94□□□□□ -1.78
USF2Q15853 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 SCARNA10-201ENST00000459255 330 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.94□□□□□ -1.78
USF2Q15853 AC073073.1-201ENST00000493920 463 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 IGLVIV-53-201ENST00000520107 367 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 RPL21P7-201ENST00000557463 483 ntBASIC3.94□□□□□ -1.78
USF2Q15853 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.94□□□□□ -1.78
USF2Q15853 SNORD95-201ENST00000579879 68 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.94□□□□□ -1.78
USF2Q15853 AC008638.3-201ENST00000603341 463 ntBASIC3.94□□□□□ -1.78
USF2Q15853 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 AC117490.2-201ENST00000610042 594 ntBASIC3.94□□□□□ -1.78
USF2Q15853 AC136428.4-201ENST00000634254 1155 ntBASIC3.94□□□□□ -1.78
USF2Q15853 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms