Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 AF129408.1-201ENST00000608767 431 ntBASIC5.47□□□□□ -1.53
UBE3AQ05086 AL391834.2-201ENST00000609982 546 ntBASIC5.47□□□□□ -1.53
UBE3AQ05086 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.47□□□□□ -1.53
UBE3AQ05086 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.47□□□□□ -1.53
UBE3AQ05086 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.47□□□□□ -1.53
UBE3AQ05086 AC073869.10-201ENST00000642016 354 ntBASIC5.47□□□□□ -1.53
UBE3AQ05086 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.47□□□□□ -1.53
UBE3AQ05086 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
UBE3AQ05086 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.47□□□□□ -1.53
UBE3AQ05086 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBE3AQ05086 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UBE3AQ05086 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UBE3AQ05086 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
UBE3AQ05086 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UBE3AQ05086 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UBE3AQ05086 AL603750.1-201ENST00000624216 1717 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC017007.4-201ENST00000503353 1352 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 RNA5SP453-201ENST00000362503 119 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 SNORA62-201ENST00000365493 153 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UBE3AQ05086 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UBE3AQ05086 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 AL021331.1-201ENST00000402817 582 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.46□□□□□ -1.54
UBE3AQ05086 EIF4A1P1-201ENST00000420241 934 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 COX6CP17-201ENST00000421389 185 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC093422.3-201ENST00000428506 305 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 DNAJC19P7-201ENST00000428811 344 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 RPL7P33-201ENST00000444159 742 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AL137845.2-201ENST00000444292 988 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 TPT1P12-201ENST00000448968 492 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC006967.1-201ENST00000467608 589 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 RN7SL319P-201ENST00000480656 221 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 GLUD1P3-202ENST00000508551 200 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 PRELID3BP5-201ENST00000508612 460 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 snoU109.6-201ENST00000516831 118 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC010476.1-201ENST00000519111 851 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.46□□□□□ -1.54
UBE3AQ05086 C1GALT1P3-201ENST00000522049 819 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 OR5AK3P-201ENST00000527486 1297 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.46□□□□□ -1.54
UBE3AQ05086 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 GCSHP4-201ENST00000538792 439 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC105254.2-201ENST00000603636 436 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.46□□□□□ -1.54
UBE3AQ05086 AC019193.2-201ENST00000610012 634 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 uc_338.9-201ENST00000617424 182 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 VN2R3P-201ENST00000422626 1412 ntBASIC5.46□□□□□ -1.54
UBE3AQ05086 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.46□□□□□ -1.54
UBE3AQ05086 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBE3AQ05086 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.45□□□□□ -1.54
UBE3AQ05086 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 CASC19-261ENST00000641853 1638 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.45□□□□□ -1.54
UBE3AQ05086 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.45□□□□□ -1.54
UBE3AQ05086 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 TTC39DP-201ENST00000416781 1688 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UBE3AQ05086 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UBE3AQ05086 RNU6-1000P-201ENST00000391066 106 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.45□□□□□ -1.54
UBE3AQ05086 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
UBE3AQ05086 AL356967.1-201ENST00000406305 431 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 RNA5SP113-201ENST00000410486 84 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 AC013404.1-201ENST00000413068 249 ntBASIC5.45□□□□□ -1.54
UBE3AQ05086 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3AQ05086 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.45□□□□□ -1.54
UBE3AQ05086 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.45□□□□□ -1.54
UBE3AQ05086 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms