Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNA5SP90-201ENST00000364801 99 ntBASIC4.61□□□□□ -1.67
CDH11P55287 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CDH11P55287 BMS1P3-201ENST00000372011 932 ntBASIC4.61□□□□□ -1.67
CDH11P55287 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH11P55287 AL645733.1-201ENST00000402250 217 ntBASIC4.61□□□□□ -1.67
CDH11P55287 RN7SKP126-201ENST00000411143 300 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC010385.1-201ENST00000412374 256 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 RPL23AP4-201ENST00000427757 463 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC006994.1-201ENST00000438212 839 ntBASIC4.61□□□□□ -1.67
CDH11P55287 RPS29P10-201ENST00000439197 166 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC044797.1-201ENST00000445744 679 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AL589765.3-201ENST00000446084 462 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AL031584.1-201ENST00000447169 754 ntBASIC4.61□□□□□ -1.67
CDH11P55287 RPL7P55-201ENST00000450522 746 ntBASIC4.61□□□□□ -1.67
CDH11P55287 HSPE1P22-201ENST00000456856 327 ntBASIC4.61□□□□□ -1.67
CDH11P55287 PSMC1P13-201ENST00000458195 985 ntBASIC4.61□□□□□ -1.67
CDH11P55287 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH11P55287 AL591473.1-201ENST00000464297 313 ntBASIC4.61□□□□□ -1.67
CDH11P55287 RPL21P6-201ENST00000479171 504 ntBASIC4.61□□□□□ -1.67
CDH11P55287 CDH12P2-201ENST00000504393 298 ntBASIC4.61□□□□□ -1.67
CDH11P55287 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH11P55287 AP000916.1-201ENST00000533869 835 ntBASIC4.61□□□□□ -1.67
CDH11P55287 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH11P55287 OR11J2P-201ENST00000555298 907 ntBASIC4.61□□□□□ -1.67
CDH11P55287 NDUFB4P11-201ENST00000560510 395 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH11P55287 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 AC096947.1-201ENST00000603233 470 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AC087763.1-201ENST00000603391 286 ntBASIC4.61□□□□□ -1.67
CDH11P55287 SUMO2P14-201ENST00000604488 293 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AL158050.2-201ENST00000605336 568 ntBASIC4.61□□□□□ -1.67
CDH11P55287 AL445222.1-201ENST00000607259 628 ntBASIC4.61□□□□□ -1.67
CDH11P55287 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH11P55287 AP003485.1-201ENST00000625093 753 ntBASIC4.61□□□□□ -1.67
CDH11P55287 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 MFSD8-213ENST00000641134 1327 ntBASIC4.61□□□□□ -1.67
CDH11P55287 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 AC083843.3-201ENST00000623679 2186 ntBASIC4.61□□□□□ -1.67
CDH11P55287 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH11P55287 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CDH11P55287 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CDH11P55287 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH11P55287 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH11P55287 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH11P55287 RNU1-106P-201ENST00000384382 164 ntBASIC4.6□□□□□ -1.67
CDH11P55287 HMGB1P10-201ENST00000395823 563 ntBASIC4.6□□□□□ -1.67
CDH11P55287 MIR1271-201ENST00000408537 86 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AL445183.3-201ENST00000414168 502 ntBASIC4.6□□□□□ -1.67
CDH11P55287 MTND4P11-201ENST00000417020 1058 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.6□□□□□ -1.67
CDH11P55287 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.6□□□□□ -1.67
CDH11P55287 MTCYBP12-201ENST00000440559 1134 ntBASIC4.6□□□□□ -1.67
CDH11P55287 ARAFP2-201ENST00000440565 559 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH11P55287 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH11P55287 RPS27P5-201ENST00000444247 244 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC004980.3-201ENST00000447046 365 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AL645937.3-201ENST00000453647 936 ntBASIC4.6□□□□□ -1.67
CDH11P55287 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 Z92846.1-201ENST00000456203 268 ntBASIC4.6□□□□□ -1.67
CDH11P55287 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 RPL7P6-201ENST00000480903 738 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC107398.1-201ENST00000486904 505 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC004453.1-201ENST00000487895 408 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC109462.1-201ENST00000491087 368 ntBASIC4.6□□□□□ -1.67
CDH11P55287 PPM1AP1-201ENST00000502740 1135 ntBASIC4.6□□□□□ -1.67
CDH11P55287 NDUFA5P12-201ENST00000503796 343 ntBASIC4.6□□□□□ -1.67
CDH11P55287 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH11P55287 RPS4XP20-201ENST00000505751 772 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC112518.2-201ENST00000508565 425 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC138938.1-201ENST00000515431 782 ntBASIC4.6□□□□□ -1.67
CDH11P55287 RNA5SP249-201ENST00000516127 99 ntBASIC4.6□□□□□ -1.67
CDH11P55287 RNU6-1308P-201ENST00000516817 103 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC012400.1-201ENST00000518452 381 ntBASIC4.6□□□□□ -1.67
CDH11P55287 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH11P55287 RPL23AP53-201ENST00000521854 457 ntBASIC4.6□□□□□ -1.67
CDH11P55287 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH11P55287 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 AC024940.3-201ENST00000538551 316 ntBASIC4.6□□□□□ -1.67
CDH11P55287 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH11P55287 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH11P55287 AC090666.1-201ENST00000578241 445 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH11P55287 AC025175.1-201ENST00000606482 759 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC012557.1-201ENST00000607115 611 ntBASIC4.6□□□□□ -1.67
CDH11P55287 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH11P55287 AC090527.3-201ENST00000619041 548 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC010608.3-201ENST00000625048 527 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms