Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 NPM1P4-201ENST00000414095 812 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC009784.1-201ENST00000426484 460 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 MED14P1-201ENST00000430517 648 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 LDHAP2-201ENST00000437325 985 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AL050341.1-201ENST00000447743 313 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC114755.5-201ENST00000447760 831 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 RPS4XP5-202ENST00000449995 1334 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 RPL17P2-201ENST00000491913 451 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 RN7SL284P-201ENST00000498823 275 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 HNRNPKP5-201ENST00000515300 253 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 RN7SKP244-201ENST00000516513 307 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 NPM1P6-201ENST00000521088 871 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.12□□□□□ -1.43
EPHB3P54753 AP003392.2-201ENST00000527269 208 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 OR6C7P-201ENST00000547875 934 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 HIGD1AP17-201ENST00000554576 276 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 ZNF519P2-201ENST00000557032 169 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.12□□□□□ -1.43
EPHB3P54753 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.12□□□□□ -1.43
EPHB3P54753 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.12□□□□□ -1.43
EPHB3P54753 AL392112.1-201ENST00000605115 829 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AL391497.1-201ENST00000608671 547 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 AC090517.2-201ENST00000614966 680 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.12□□□□□ -1.43
EPHB3P54753 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.12□□□□□ -1.43
EPHB3P54753 AC093909.5-201ENST00000621839 1799 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 MIR4278-201ENST00000636094 69 ntBASIC6.12□□□□□ -1.43
EPHB3P54753 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EPHB3P54753 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.12□□□□□ -1.43
EPHB3P54753 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
EPHB3P54753 SNORA64.1-201ENST00000362600 132 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 Y_RNA.70-201ENST00000362886 110 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 RN7SKP160-201ENST00000363804 340 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
EPHB3P54753 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
EPHB3P54753 RPL7P58-201ENST00000402913 758 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL391361.1-201ENST00000405580 489 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 NACAP7-201ENST00000407371 609 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 AC245054.1-201ENST00000420944 258 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 Z99497.1-201ENST00000421282 135 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 GAPDHP48-201ENST00000436626 961 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 AL592437.1-201ENST00000443781 492 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL118496.2-201ENST00000448300 230 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 GAPDHP36-201ENST00000480688 918 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 EIF3LP3-201ENST00000495197 822 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 FTH1P8-201ENST00000498161 514 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.11□□□□□ -1.43
EPHB3P54753 RNU6-678P-201ENST00000516832 109 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.11□□□□□ -1.43
EPHB3P54753 OR5AZ1P-201ENST00000527448 943 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC104383.1-201ENST00000530297 370 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.11□□□□□ -1.43
EPHB3P54753 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.11□□□□□ -1.43
EPHB3P54753 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.11□□□□□ -1.43
EPHB3P54753 AC079171.1-201ENST00000568788 914 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.11□□□□□ -1.43
EPHB3P54753 ROCK1P1-201ENST00000573767 549 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 FGF7P1-201ENST00000582820 288 ntBASIC6.11□□□□□ -1.43
EPHB3P54753 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms